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Two new high-resolution crystal structures of carboxysome pentamer proteins reveal high structural conservation of CcmL orthologs among distantly related cyanobacterial species
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DOE Metrics
FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual Total* Actual % of Goal … counted once, even though an individual may have several projects/roles. Sequencing Quarter Total Bases (Trillions) … counted once, even though an individual may have several projects/roles. Sequencing Quarter Total Bases (Trillions) …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship internship program between the DOE Joint … summer of 2014 has grown to a total of 75 with the inclusion of the 2023 cohort. Each of them has brought invaluable … partnership had become a “model” of sorts at the Lab. “This project represents part of our long term efforts to …
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Marine Microbe Contains Multitudes
A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct … from the warm, well-lit surface, to the blue-lit twilight zone, to the continuous pressure of the dark abyss, 4000 m … out that, without the JGI, the discoveries made in this project wouldn’t have been possible. Scientists hadn’t known …
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Nitrosococcus watsonii sp. nov., a new species of marine obligate ammonia‐oxidizing bacteria that is not omnipresent in the world's oceans: calls to validate the names ‘Nitrosococcus halophilus’ and ‘Nitrosomonas mobilis’
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Olpidium, The Key to the Origin of Terrestrial Fungi
Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … A collaborative team led by Joey Spatafora at Oregon State University, Jason Stajich at the University of … habitats. The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… team  announced in  Nature Microbiology an important addition to the synthetic biologist’s toolkit: a technique for  c … this Lawrence Berkeley National Laboratory (Berkeley Lab) Newscenter story and this piece in  Current Opinion in … the amount of DNA that can be inserted at a time. In a  project detailed in  ACS Synthetic Biology , Yoshikuni and …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
… for our 2025 Community Science Program Annual Call. These projects include cutting-edge research into microbial … mats — to reveal how these systems adapt and contribute to global biogeochemical cycles. Additional … Deputy Director of JGI’s User Programs. “Many of these projects are large in scale and involve multiple …
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What Happens Underground Influences Global Nutrient Cycles
EMSL and JGI announce FY 2020 collaborative FICUS projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national user facilities—the  Environmental Molecular Sciences …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth (Toby) Kellogg … (Danforth Center) drove up and down the highways of the continental United States, occasionally pulling over to the … JGI group has been wonderful to collaborate with, and this [project] wouldn’t have been possible without their …
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Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil
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Bacteria and Fungi Divvy Up the Work in Forest Floor
Bacterial enzymes play second fiddle to those from fungi when it comes to breaking … of researchers have found that there is a striking division of labor between the two groups. Fungi are much more … sequences assembled as part of its 1000 Fungal Genomes Project . To map microbial activity, Baldrian’s team …
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