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At the nexus of three kingdoms: the genome of the mycorrhizal fungus Gigaspora margarita provides insights into plant, endobacterial and fungal interactions
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Mechanically induced localisation of SECONDARY WALL INTERACTING bZIP is associated with thigmomorphogenic and secondary cell wall gene expression
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Defining a Pan-Genome for Antarctic Archaea
… and researchers are interested in learning how these microbes have learned to adapt from marine to hypersaline … occur in response to viral infections and are important for virus-host interactions. Analysis of strain variation showed that … (project 4031). The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …
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Genome sequencing of Rigidoporus microporus provides insights on genes important for wood decay, latex tolerance and interspecific fungal interactions
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Multilevel analysis between Physcomitrium patens and Mortierellaceae endophytes explores potential long‐standing interaction among land plants and fungi
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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hello, and welcome back for Episode 7 of the Natural Prodcast. It’s been about a month now since …
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Uncovering Novel Genomes from Earth’s Microbiomes
… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … small fraction of Earth’s microbial diversity. Because most microbes cannot be cultivated under laboratory conditions, … .) Nayfach also worked with another team on predicting host-virus connections between all viruses in  IMG/VR (Virus) and …
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Host population diversity as a driver of viral infection cycle in wild populations of green sulfur bacteria with long standing virus-host interactions
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Synergistic interactions between anammox and dissimilatory nitrate reducing bacteria sustains reactor performance across variable nitrogen loading ratios
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Metabolomics Technology Group
… Our lab is using mass spectrometry based metabolite profiling to provide direct biochemical datasets to improve our understanding of microbial metabolism. Of particular interest is … and dynamic metabolite networks of environmental microbes and how they transform their environment. Research …
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Nikos Kyrpides
… 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes … Joint Genome Institute, Dr. Kyrpides led the development of the genome analysis and Bioinformatics core at Integrated … his postdoctoral studies with Carl Woese at the University of Illinois at Urbana-Champaign and at Argonne National …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … The planet’s microbial diversity is immense, yet much of it remains unknown. For more than a decade, researchers … organisms to respond to environmental stresses or mediate interactions with each other (sometimes antagonistic ones, …
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