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Large‐scale maps of variable infection efficiencies in aquatic Bacteroidetes phage‐host model systems
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Metabolic model predictions enable targeted microbiome manipulation through precision prebiotics.
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Integrating chromatin conformation information in a self-supervised learning model improves metagenome binning
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JGI@25: Roots of a Mutualist Relationship
… from looking at single organisms to applying a broader ecosystem perspective, involving more multidisciplinary …
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Plasmid Copy Number Engineering Accelerates Fungal Polyketide Discovery upon Unnatural Polyketide Biosynthesis
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Green genes from blue greens: challenges and solutions to unlocking the potential of cyanobacteria in drug discovery
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Applying Viral Genomics Expertise to Understanding the Human Virome
… their expertise in developing and managing public viral genomics resources such as analytical tools and data … in developing and maintaining the JGI’s  Integrated Microbial Genomics and Microbiomes (IMG/M) system. The … and understanding viral genomes and their interactions with microbial hosts. The second project, “ A consortium …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… small size of its genome also simplifies metabolic modeling and pathway optimization for enhanced lipid …
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JGI@25: Strengthening Soybean
… immediately spurred further research and additional discoveries. Stacey noted that even prior to the sequence …
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A One-Stop Shop for Analyzing Algal Genomes
… sequence and understand. A team of researchers led by Algal Genomics Program lead Igor Grigoriev and data scientist Alan … tools created by JGI researchers, including the Integrated Microbial Genomes and Microbiomes (IMG/M) system for microbial and metagenome datasets, MycoCosm for comparative …
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Mike Sneddon
… leader in data, software, compute, and AI for large-scale genomics and lab informatics. Prior to joining JGI in late … (2012).  Sneddon, MW, Faeder, JR, and Emonet, T. Efficient modeling, simulation and coarse-graining of biological …
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Genomic Signatures for Sedimentary Microbial Utilization of Phytoplankton Detritus in a Fast-Flowing Estuary
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