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JGI Accepts 17 Proposals for Community Science Program
… on harnessing genomics to developing sustainable resources for biofuels and bioproducts. Andrew Nelson of the Boyce … a previous international collaboration that produced the reference genome sequence for Eucalyptus grandis. Accessing … State University and colleagues aim to understand how soil microbiomes in fire-adapted ecosystems respond to low and …
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Fishing for Novel Cellulose Degraders
The Science One of the most vital pieces of equipment for fly fishing is a boxful of lures. Designed with feathers … microbes. The new technique is another tool for microbial ecologists to learn more about the diversity … tested the approach on bacterial laboratory models to set a reference for its performance, and then applied it to …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
For the first time in several years, the DOE Joint Genome … UC Merced students this past summer. This year’s cohort for the JGI-UC Merced Internship Program was brimming with … Genetic Elements and CRISPR Spacers in the Conifer Needle Microbiome Carlos Vazquez and mentor Bryce Foster, …
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iPHoP: A Matchmaker for Phages and their Hosts
… be a specific host the virus has adapted to commandeer. For bacteriophage viruses, these hosts are microbes like … researchers have found more of these viruses than ever before, in all kinds of ecosystems. However, matching these … it predicted many more likely hosts for viruses in human microbiome samples, reflecting factors such as the quality …
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Katherine Louie
… to develop the metabolomics program, and in 2019 became Platform Lead where she manages metabolomics production for … diterpenoids impact the composition of the root-associated microbiome in maize (Zea mays). Scientific Reports. 2021. … al. Mass Spectrometry for Natural Product Discovery. 2020.  Reference Module in Chemistry, Molecular Sciences and …
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2022 Progress Report
… the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab …
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Four principles to establish a universal virus taxonomy
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Natural Prodcast Episode 16: Marcy Balunas
… and the bacteria and how the chemistry is going back and forth between them is part of what fascinates me about what … switched to chemical engineering and realizing that wasn’t for me and eventually, I got to chemistry. And as I was … of her work on molluscs and their cyanobacterial feeding preferences A 10″ Simple Rules” article on increasing …
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Natural Prodcast Episode 1: The Primer, Part 1
Takemura, whose voice you’ll hear in a minute – we work for the US Department of Energy Joint Genome Institute, or … environment – problems that might need special technology for DNA sequencing, genomics, metabolomics, and synthetic … natural products. And natural products is an older term for the special, natural chemical compounds that you find in …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
On September 1, JGI held a JGI Engagement: Pro Tips for Successful Community Science Program (CSP) Applications … the data and work with the data. Q: How would you include a reference or citation in a proposal? A: If you’re presenting … or if you want to give some background of the field, references would be encouraged. And you can either put those …
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Extensive remodeling of a cyanobacterial photosynthetic apparatus in far-red light
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Novel bacterial clade reveals origin of form I Rubisco
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