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Co-occurrence networks reveal more complexity than community composition in resistance and resilience of microbial communities
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Taking Stock of the Known and Unknown Microbial Space
… in sequencing technologies have led to an abundance of microbial genomes becoming available to the global … of Science User Facility located at Lawrence Berkeley National Laboratory Berkeley Lab), have taken stock of the … key roles in regulating global nutrient cycles. The information gained from understanding the interactions between …
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Metagenomic Sequencing of an In Vitro-Simulated Microbial Community
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High-resolution phylogenetic microbial community profiling
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Genome sequence of Phaeobacter daeponensis type strain (DSM 23529T), a facultatively anaerobic bacterium isolated from marine sediment, and emendation of Phaeobacter daeponensis
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Marine Synechococcus isolates representing globally abundant genomic lineages demonstrate a unique evolutionary path of genome reduction without a decrease in GC content
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Three Join the JGI User Executive Committee
… (UEC) recently welcomed three new members earlier this month – Sneha Couvilion of Pacific Northwest National Laboratory, Chris Schadt of … Professor in the Department of Ecology, Evolution and Marine Biology at UCSB, where she leads a research group …
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Dan Rokhsar
… in 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed towards the sequencing, annotation, and analysis of three human chromosomes. After successful completion of … IBM Watson Research Center, Yorktown Heights, NY … Publications … 2018 Marthella Foskett Brown Chair, …
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Genome sequence of Phaeobacter inhibens type strain (T5T), a secondary metabolite producing representative of the marine Roseobacter clade, and emendation of the species description of Phaeobacter inhibens
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI … methane and organic matter.  However, to get all of the information that SIP offers, researchers must take on a fairly … around the world, the team have now published a  Minimum Information for any Stable Isotope Probing Sequence …
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Pinning Down a Piece of Photosynthesis
By studying the structure and function of a cyanobacterial protein, researchers have new insights … for food webs as they turn carbon dioxide and water into oxygen and sugars. How photosynthesis works, though, is much … work well in further experiments, so she could glean information about their specific function, filling in our …
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Measurement of bacterial replication rates in microbial communities
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