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Operation-driven heterogeneity and overlooked feed-associated populations in global anaerobic digester microbiome
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Variation in Root Exudate Composition Influences Soil Microbiome Membership and Function
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Rapid changes in coastal ocean microbiomes uncoupled with shifts in environmental variables
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Reference-free structural variant detection in microbiomes via long-read co-assembly graphs.
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Quantitative genetic-by-soil microbiome interactions in a perennial grass affect functional traits
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … to the DOE mission, switchgrass is among the JGI Flagship Plants . Since 2007, the JGI has been working on identifying … climate resilient switchgrass. Aside from climate-related studies, researchers have also harnessed the switchgrass …
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What Happens Underground Influences Global Nutrient Cycles
… Sabeeha Merchant of the University of California, Berkeley studies the alga  Chlamydomonas reinhardtii , one of … gene functions that may be relevant to both algae and land plants.  Within the biogeochemistry group, one of the four … on an aspect of the  Phenotypic Response of the Soil Microbiome to Environmental Perturbations   under PNNL’s …
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Soil virus offers insight into maintaining microorganisms
… retrieved using the  JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) data portal. The IMG suite is a … domains of life.  Using the IMG suite, JGI retrieved 142 of the GH75 AMGs, which encode enzymes that break down … in archaea, fungi or bacteria. Certain similarities with bacterial counterparts suggest the viral versions of the …
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Ben Bowen
… molecular networking, chemoinformatics, and bioinformatics facilitates impactful scientific discoveries, supporting the … 2024 Berkeley Lab Recognition of Excellence Award 2016 R&D 100 Winner 2014 Berkeley Lab Director’s Award for … T., Rübel, O., Keasling, J., Northen, T., & Bowen, B. (2017). OpenMSI Arrayed Analysis Toolkit: analyzing spatially …
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Systematic Identification of Gene Families for Use as “Markers” for Phylogenetic and Phylogeny-Driven Ecological Studies of Bacteria and Archaea and Their Major Subgroups
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Bacterial Genome Annotation
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A Molecular Study of Microbe Transfer between Distant Environments
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