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Overview of the Genomes OnLine Database (GOLD)
… TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why curated metadata matters. …
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The exceptional form and function of the giant bacterium Ca. Epulopiscium viviparus revolves around its sodium motive force
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Genome Analysis of Planctomycetes Inhabiting Blades of the Red Alga Porphyra umbilicalis
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Genomic Analysis of Organismal Complexity in the Multicellular Green Alga Volvox carteri
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Targeted genetic manipulation and yeast-like evolutionary genomics in the green alga Auxenochlorella
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… For the first time in several years, the DOE Joint Genome … Class using CRAGE Technology Emerald Nash and mentor Jonelle Basso, Experimental Study of Root Colonization by … and Analysis of Eukaryotic MAGs from Novel Taxa Christopher Bivins and mentor Satria Kautsar, Comparing BGC …
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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Jane Grimwood Named HudsonAlpha Genomics Chair
… Spencer Chair in Genomics at the HudsonAlpha Institute for Biotechnology! Loretta Spencer served as a manyterm mayor of Huntsville, Alabama and is known for her contributions to rapidly growing the economy of … she has continued to contribute across JGI plant genomes. She has appeared on the annual Highly Cited …
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Four chromosome scale genomes and a pan-genome annotation to accelerate pecan tree breeding
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Draft genome of Paraburkholderia caballeronis TNe-841T, a free-living, nitrogen-fixing, tomato plant-associated bacterium
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… (Berkeley Lab), comes in. The JGI is uniquely positioned to enable this kind of science; through its DNA … PI on this project. “I view the program as an excellent platform to build collaborative research initiatives.” Yasuo … enzymes and how they grab hold of different substrates. By analyzing these relationships with machine learning, they …
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An Automated Tool for Assessing Virus Data Quality
… recovered and identified from environmental samples (metagenomes). However, the quality and completeness of … virus sequences vary widely. In a previous effort, an international consortium recommended specific … contiguous sequences (contigs) of proviruses flanked on one or both sides by genes from the host organism. With the …
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