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Metagenomic analysis of a stable trichloroethene-degrading microbial community
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Measurement of bacterial replication rates in microbial communities
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Spatial, Temporal, and Phylogenetic Scales of Microbial Ecology
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Missing microbial eukaryotes and misleading meta-omic conclusions
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Maast: genotyping thousands of microbial strains efficiently
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An Automated Tool for Assessing Virus Data Quality
… recovered and identified from environmental samples (metagenomes). However, the quality and completeness of … the genomes of these viruses and associate them with their microbial hosts. However, assembling viral genomes from … from IMG/VR , a database that is part of the Integrated Microbial Genomes & Microbiomes (IMG/M) suite, as well as …
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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to advancing the field … and maximize the benefit to society. Inspired by the Human Genome Project (HGP), and building upon the principles for … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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JGI@25: Stories from Intern Alumni
… help solve energy and environmental challenges. Over the past 25 years, the JGI has hosted interns from a number of …
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Webinar: MycoCosm Tutorial
… data portal , an interactive collection of sequenced fungal genomes, omics data and comparative analysis tools. … A(nswer): Our focus is on fungi, algae, plants, and the microbial world but we also annotated several Phytophthora … resources for plants (phytozome), algae (PhycoCosm), and microbial world (IMG) 29.  Q: Does MycoCosm support diploid …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… results from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for … most species do not grow easily in the lab. To access the genomes of uncultured  microbes , scientists usually employ … extracting single cells and then amplifying their DNA for genome sequencing was no easy task. The traditional way of …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… to spring. These biodiversity hotspots harbor specialized microbial communities living in extreme conditions. The … structures that enable organisms to swim around. However, genome and metagenomic sequencing conducted by the U.S. … diverse metabolic capabilities offer insights into how microbial processes might be harnessed for applications …
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A Collaboration to Improve Plant Genome Annotations Across Species
… To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the HudsonAlpha … Institute for Biotechnology, which specializes in genome improvement for plants. As part of that partnership, … diverse plant species. It was developed to improve plant genome annotations at the US Department of Energy (DOE) …
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