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Reference genome sequence of the model plant Setaria
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Rex Malmstrom
… of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ … in metabolically active, membrane-bound organelles. Science  376,1453-1458 Nuccio et al 2022 . HT-SIP: a … unicellular marine predators.  PNAS 116 (41), 20574-20583 Couradeau, J.S. et al. 2019. Probing the active fraction of …
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New Research Sheds Light on Diversity in the Deep Sea
… deep-sea vents hold vast potential for bioenergy.   The Science Hydrothermal vents are ocean-floor openings in the … the makeup and functioning of a given microbial community. Scientists with the U.S. Department of Energy Joint Genome … (IMG/M) portal. The study,  published in the  Microbiome journal, broadens our understanding of the unique …
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Tanja Woyke Elected to American Academy of Microbiology
Genomics and Systems Biology Division of the Lab’s Biosciences Area since 2018. Woyke also holds appointments as … has been groundbreaking. The JGI is most fortunate to have scientists of Dr. Woyke’s caliber support the JGI User community in accessing our resources and help them to push the boundaries of energy …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… between some archaeal hosts and their hitchhikers. The Science Within the archaeal domain, there is a group of tiny … interactions are difficult to study in the lab. Metagenomics provides new views of these relationships.  … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Crysten Blaby-Haas
Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials … Berkeley lab. She earned her PhD in Microbiology and Cell Science in 2011 from the University of Florida, working with … NIH Postdoctoral Researcher, UCLA … Handling Editor, Journal Experimental Botany, 2022 – present  University of …
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Scientific Advisory Committee
Advisory Committee (SAC) is a board convened by the JGI Director to provide a scientific and technical overview of the JGI. The SAC is chartered to render advice, guidance, … programs at the JGI; and overview of the Community Science Program (CSP). A crucial job of the committee is to …
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Cataloging the Microbes that Manage the Health of River Systems
… on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , researchers describe a … be the first publicly available, river-focused microbial resource that provides information at multiple scales from … systems, these communities remain understudied. Through the JGI’s Community Science Program, Colorado State University …
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Feed Your Friends: Do Plant Exudates Shape the Root Microbiome?
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Dealing with Drought: Uncovering Sorghum’s Secrets
… of the cereal crop’s genes respond to drought stress. The Science Fields of drooping stalks and cracked earth are … such as heat waves, droughts and floods. The planet’s resources are being stretched by a growing human population and … and the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, bacteria, archaea, fungi, viruses — to support scientists around the world. Most of those researchers send their samples in from afar, …
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A bacterial toolkit for plants
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