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The Surprising Structure of a Shrub Willow Sex Chromosome
… of mammals is, for the first time, seen in a plant. The Science Sex in plants can be befuddling. Most species are … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … The JGI sequenced the shrub willows through the  Community Science Program , using long-read sequencing to assemble the …
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Evolution of a Fungal Gene Expression Regulator
… Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or G in a genome sequence can … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, and others like it, are uncovering …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… to host some of the brightest minds in genetics as part of our  2022 Annual Meeting . The meeting was a hybrid event, … made possible by CRISPR-Cas9; the Weizmann Institute of Science’s Assaf Vardi, who delved into algae blooms and the … approached Doudna with repeated genetic sequences (already known as CRISPR) that came up in her team’s …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… talk and a tech talk. Stop by the JGI booth to learn about our user programs and how we can help advance your science. …
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Boosting Small Molecule Production in Super “Soup”
… Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … able to make the same amount of a product in just eight hours that growing cells take three days to make, which is a … are partnering with Yasuo Yoshikuni and Ian Blaby of the DNA Synthesis Science Program . “This collaboration brings …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant to living on … working to address some of the most pressing challenges of our time. For more information, please visit  …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… provide insights into environmental tendencies The Science The  Metagenome Stability Diagram — a tool within … the tool to correlate protein annotations with ratios of DNA sequence fragments from the ecosystems. Selecting a … is of interest to the Department of Energy (DOE) Office of Science’s Biological and Environmental Research …
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Gut Fungi: Unexpected Source of Novel Chemicals
… expensive feat thought to be too costly for them. The Science Anaerobic fungi, which die in the presence of … can breathe oxygen — just like we do. Oxygen is a rich source of energy, and because anaerobic fungi can’t harness … natural products . Yet, combing through the genomes of four anaerobic fungal species has revealed, for the first …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… to the worldwide scientific community through its  User Programs on a competitive, peer-reviewed basis. Speakers and … a keynote speaker addressed the conference, sharing the journeys of their research careers, and showcasing the broad … of the 2023 JGI Annual Meeting. As the JGI’s Metagenome Science Program Head, Emiley Eloe-Fadrosh, introduced Bruce …
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Fungus Fuels Tree Growth
… growth of poplar, a potential biofuel feedstock.     The Science The fungus  Mortierella elongata enjoys a dual … The cuttings included genotypes from the DOE BioEnergy Science Center (BESC), predecessor of  DOE’s Center for … as secreted proteins. However,  M. elongata  seems to encourage the plant to have leakier cell walls and weaker …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… this “ data tsunami ,” as Kathy Yelick of the Computing Sciences Area at Lawrence Berkeley National Laboratory … to create pipelines, tools and other standardized data resources that the global research community can access and use … at the JGI and Berkeley Lab were developing specific programs to handle this scale of data. Part 2: Souped Up …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… held a JGI Engagement: Pro Tips for Successful Community Science Program (CSP) Applications Webinar inviting … Investigator call for proposals.  Tips: Contact us with your questions ([email protected]) Carefully read … look at the PI’s track record to make sure that they have already worked with this type of data set. Having a co-PI …
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