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JGI announces 2024 Functional Genomics awardees
… and omics capabilities to enhance understanding of gene and genome function. Tapping into these functions allows … to reveal metabolic pathways that could ultimately enable new or more efficient biotechnologies.  Below find a list of …
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Triggering Morel Fruiting
… Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … external source.  The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information … sequences and annotations are available on JGI’s fungal portal  MycoCosm . Based on these analyses, we conducted …
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User Advisory Committees
… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National … in our workplace and seek to establish with our stakeholders. The guiding principles for participating on JGI … and strategic objectives of the microbial and metagenome programs. The committee serves as the program's key …
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PlantSEED enables automated annotation and reconstruction of plant primary metabolism with improved compartmentalization and comparative consistency
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Improving Synthetic Biology Communication: Recommended Practices for Visual Depiction and Digital Submission of Genetic Designs
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Driving through stop signs: predicting stop codon reassignment improves functional annotation of bacteriophages
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… next firestorm. The majestic sentinel oaks of the Golden State have been succumbing to a pathogen. This … — one previously unseen — is, in fact, a microscopic water mold, genetically related to such aquatic species as diatoms … trace its origins, the researchers engaged the DOE Joint Genome Institute (JGI), with support of the US Department of …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… determination. Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and … can be found in fossil records dating over a billion years old. It’s an insanely diverse group of organisms that … incoming students with basic data science skills and portals used by the JGI to process data. These areas had …
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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding of Antarctic biogeography. … in the haloarchaeal gene pool, a team led by University of New South Wales (UNSW)-Sydney professor Rick Cavicchioli … contribute to global biogeochemical cycles, and possibly cold-temperature enzymes for biotechnological use. Summary …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute with Dan Rokhsar, who also holds a joint appointment with the University of California, … is an Assistant Professor at Binghamton University in New York. He and Rokhsar have  recently published a Nature …
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Genomes OnLine Database (GOLD) v.6: data updates and feature enhancements
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … root. Upon maturity, the cucumber roots were rinsed with cold water to stimulate the release of zoospores by Olpidium … to the terrestrial ecosystems exposed fungi to numerous new ecological niches and triggered rapid diversification of …
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