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Building Sphagnum Genomic Resources
… model system focused on carbon cycling studies, rather than for food or fuel applications. The Impact Sphagnum’s impact … permafrost from the warming regional temperatures. For this reason, the U.S. Department of Energy is overseeing … cycling is a carbon flux regulator since sulfate-reducing microbes prevent methane production by routing the carbon …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… community will bridge fundamental knowledge gaps to advance biotechnology and biomanufacturing.  As a leader in genomics … environmental systems.”  The user facility’s new plan goes beyond outlining a broad vision and multiple scientific, … of DOE resources. This approach, combining a forward-looking vision with a detailed implementation path, has …
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The fungus that made itself at home
… new ecological habitat. The Science By comparing genetic information from similar organisms, researchers have gained … rot Serpula lacrymans towards breaking down plant mass for conversion to sustainable, alternative biofuels and bioproducts. This study lends insights on how …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… For the first time in several years, the DOE Joint Genome … UC Merced students this past summer. This year’s cohort for the JGI-UC Merced Internship Program was brimming with … mentors TBK Reddy and Dimitri Stamatis, Porting XML/Python Based Quality Control to Database/Java Based Process in Gold …
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Virus Discoveries that Keep Getting Bigger
… Sequence-based studies — from metagenomics to single-cell work — have … on giant virus diversity, and how sequencing and bioinformatics have sped up the study of giant viruses. The … ecosystem-level nutrient cycling and carbon storage. For example, the marine algae  Emiliania huxleyi, a …
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Disclaimer
… NOTICE Information from this server resides on a computer system … the United States Government nor the University of California nor any of their employees, makes any warranty, … including the warranties of merchantability and fitness for a particular purpose, or assumes any legal liability or …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… Programs Deputy Axel Visel teamed with University of California (UC), Merced assistant professor Suzanne Sindi from … explained: “One of the hallmarks of JGI is our diverse workforce and our diverse collaborators around the world. That … Accepted a post-doctoral position with the Plant and Microbe Interaction group at Oak Ridge National Laboratory …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Everglades in Palm Beach County, and particularly about the microbes that play roles in the methane cycle. Their data … provides the only known reference microbiome data sets for the Loxahatchee Refuge,  was published in the journal  Environmental Microbiome . “Before JGI was involved, I was not sure we could even complete …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… other oceans. That zinc turns out to be extremely important for polar phytoplankton.  After peering into the function and activity of phytoplankton genes and looking at how communities of these microalgae interact, … at the University of East Anglia, leads this effort to understand what makes polar photosynthesizers tick. …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… Input & sequencing Q(uestion): How much DNA is needed for “regular” vs the ultra-low input library creation protocols for PacBio? A(nswer):  Regular PacBio typically requires ~ … require input in the ~ 30 – 100ng range. Note that beyond quantity, input quality (i.e., presence of “intact” …
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Four principles to establish a universal virus taxonomy
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… from the ACTIVE SITES Research Center (ACSI), the Centre for Water and Environmental Research (ZWU) of the University … biology, omics, and big data science, machine learning for experimental science, energy conversion and water … in many impactful papers in recent years, but are also looking forward to jointly expanding into new areas of …
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