Feature selection and causal analysis for microbiome studies in the presence of confounding using standardization
Results
Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
Comparative Genomic Analysis of Phylogenetically Closely Related Hydrogenobaculum sp. Isolates from Yellowstone National Park
AmiGO: online access to ontology and annotation data
Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection
Plant compartment and genetic variation drive microbiome composition in switchgrass roots
Terabase-Scale Coassembly of a Tropical Soil Microbiome
A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data
The genome sequence of Bifidobacterium longum subsp. infantis reveals adaptations for milk utilization within the infant microbiome
Metagenome-Assembled Genomes from a Microbiome Grown in Dairy Manure Hydrolysate
Next generation sequencing data of a defined microbial mock community
The future of legume genetic data resources: Challenges, opportunities, and priorities