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Scaling Up Existing Skill Sets
UC Merced students with seven JGI researchers for bioinformatics internship opportunities in fields ranging from … the JGI has really motivated me to think outside of simply looking for jobs/postdocs in industry or academia. It was … to reach out to anyone in the Institute to get feedback and insights on the project and everyone’s willingness …
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Partnerships: Myco-Ed
The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based Undergraduate Research Experience (CURE) that consists of coordinated …
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Jeremy Schmutz
Schmutz’s involvement with the DOE Joint Genome Institute dates back to 1997, when he was working for the Stanford Human … 2023. JGI plant gene atlas: an updateable transcriptome resource to improve functional gene descriptions across the …
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“A STEM career is in reach and accessible”
Though a partnership with Biotech Partners, a nonprofit that provides underserved youth in the Bay Area with personal, … academic and professional development experiences that increase participation in higher education and access to fulfilling science careers, …
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Correlation-based network analysis combined with machine learning techniques highlight the role of the GABA shunt in Brachypodium sylvaticum freezing tolerance
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Jack Gilbert
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
As part of the JGI’s 25th anniversary celebration, the 2022 Annual Meeting featured speakers who shared a look back at the JGI’s history, from its beginnings in the … He managed a small but important part of that program — looking at ethical, legal and social affairs — before …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
Congratulations to the 2023 Highly Cited Researchers from the JGI … highlights the vast functional diversity of microbes by looking at protein function within them. Kyrpides and Roux … ancestors. Tanja Woyke contributed to a study in ISME Journal that identified flagella in the terrestrial ancestors …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… fungi of Chytridiomycota (the “chytrids”).  A collaborative team led by Joey Spatafora at Oregon State University, … fungi by James et al. and Sekimoto et al . In both studies, however, Olpidium was unexpectedly grouped with … various origins, ranging from fungi, plants to bacteria. Back in 2011 when these genome and transcriptome data were …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of … then allowed the team to ask, for the 34 hosts they found, how prevalent in the mat are their viruses? The abundance of … a riff, developed by others, on “Kill the Winner” — “Piggyback the Winner.” In the microbial mat, the data suggest …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a written report that is published in a scientific journal is the ultimate achievement. To get to this point … machine learning tools. “This was very exciting to see how Rhondene not only embraced the research question and …
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Conserved genomic collinearity as a source of broadly applicable, fast evolving, markers to resolve species complexes: A case study using the lichen-forming genus Peltigera section Polydactylon
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