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Machine Learning Reveals Signatures of Promiscuous Microbial Amidases for Micropollutant Biotransformations
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Few-Shot Learning Enables Population-Scale Analysis of Leaf Traits in Populus trichocarpa
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Whole-genome sequencing and intensive analysis of the undomesticated soybean (Glycine soja Sieb. and Zucc.) genome
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Finding the Fermenters
Harnessing BER-funded data resources, researchers built an interactive and … with little or no oxygen, life had found other ways to produce energy, using a process called fermentation. To better … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Sequencing the Genomes of the First Terrestrial Fungal Lineages: What Have We Learned?
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Integrating chromatin conformation information in a self-supervised learning model improves metagenome binning
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Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost
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EnZymClass: Substrate specificity prediction tool of plant acyl-ACP thioesterases based on ensemble learning
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David Goodstein
With a background in experimental and computational surface physics, Dr. Goodstein held positions at Cornell, IBM, Utah State University, and semiconductor equipment manufacturer KLA-Tencor before joining the JGI in 2002. Initially focused on building tools to …
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Metagenome Program
… technologies to decode the genomes of microbes in their natural environments. This work encompasses bacteria, … and metabolic potential, with implications for energy production, environmental sustainability, and many other … viral populations. Enabling microbiome data science:  The JGI supports microbiome data science by enabling comparative …
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Natural soil microbes alter flowering phenology and the intensity of selection on flowering time in a wild Arabidopsis relative
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… show methanogenesis is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent greenhouse gas, regulate Earth’s climate. Most methane is produced in environments without oxygen through a process called … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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