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A New Nomenclature of Xenopus laevis Chromosomes Based on the Phylogenetic Relationship to Silurana/Xenopus tropicalis
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The IMG/M data management and analysis system v.7: content updates and new features.
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The Genome Sequence of Methanohalophilus mahii SLPT Reveals Differences in the Energy Metabolism among Members of the Methanosarcinaceae Inhabiting Freshwater and Saline Environments
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… their JGI mentors, what challenges they overcame, and what new skill sets they look forward to taking back to school.  … And also specifically, it sparked my interest in bioformatics, so that’s what I’m gonna take with me to the … previously I had I don’t know how to communicate with team members previously. I think I may keep doing research, but …
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Supporting FAIR Scientific Workflows with the JGI Analysis Workflow Service (JAWS)
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Trent Northen
… the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic methods available to JGI users.  Dr. Northen’s research is focused on using … to link genomes with environments to understand how webs of microbes cycle carbon and sustain biomes via the …
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An Integrated Dataset to Understand Ecosystem Interaction
… data set will help identify how different elements of the ecosystem interact and respond to changes in the … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … This research was sponsored by the U.S. Department of Energy, Office of Science, Biological and Environmental …
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The IMG/M data management and analysis system v.6.0: new tools and advanced capabilities
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Twenty-five years of Genomes OnLine Database (GOLD): data updates and new features in v.9.
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Yasuo Yoshikuni
… Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science Program since 2015. The mission … has supported over 250 projects since it started. At the JGI, Dr. Yoshikuni also manages the Synthetic Biology … of non-model yeasts for production of biofuels and renewable chemicals, developing genome engineering tools for …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… before. In 2006, the JGI produced 33 billion base pairs of sequence; by 2023, that number was almost 717 trillion. Last year, the … “When we proposed to do the Mendota time series, we knew that it was going to be more samples and more data per … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Experimentally-validated correlation analysis reveals new anaerobic methane oxidation partnerships with consortium-level heterogeneity in diazotrophy
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