Results

Genomic characterization of three marine fungi, including Emericellopsis atlantica sp. nov. with signatures of a generalist lifestyle and marine biomass degradation
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JGIota: Looking Back at Methane-Making Microbes
We count on livestock for food and fiber, but raising these animals also produces an atmosphere-warming gas: methane. Those emissions mainly come from gut … bacteria and archaea breaking down plant matter. So since 2010, the JGI has supported researchers studying those …
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Tanja Woyke
… at the Eberhard Karls University Tübingen (Germany), Dr. Woyke pursued her postdoctoral research at the DOE Joint … Laboratory for Ocean Sciences Single Cell Genomics Center (2013-current) Science Advisory Board Member for Science … chemoautotrophic symbiont genome. Science 315, 998-1000. Woyke et al. 2006. Symbiosis insights through …
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User Executive Committee Charter
… including technical capabilities offered, proposal review procedures, and the annual user meeting. The UEC also acts … community and promotes communication and collaboration within the user community. UEC responsibilities include: … and concerns; Provide feedback and make recommendations on how the JGI Science Programs can best support the user …
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Annotation survey and life-cycle transcriptomics of transcription factors in rust fungi (Pucciniales) identify a possible role for cold shock proteins in dormancy exit
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Back in the Lab: the 2023 Summer Intern Experience
… years for students and researchers alike at the JGI. With the past few years upended by the pandemic, 2023 gave interns the opportunity to be fully immersed in not only their work, but the opportunity to collaborate with and learn from …
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Kjiersten Fagnan
Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing … Networking, Storage and Analysis, 2018, pp. 717-730, doi: 10.1109/SC.2018.00060. Wood-Charlson, E.M., Anubhav, …
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Metagenome Sequence Analysis of Filamentous Microbial Communities Obtained from Geochemically Distinct Geothermal Channels Reveals Specialization of Three Aquificales Lineages
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The Expanding Universe of Methane Metabolisms in Archaea
Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. Methane is a … by the other study co-authors, and reconstructed from these 10 metagenome-assembled genomes (MAGs) representing new … “Therefore, determining under which form it emerged and how it gave rise to the different pathways we see today is …
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The draft genome sequence of the ascomycete fungus Penicillium subrubescens reveals a highly enriched content of plant biomass related CAZymes compared to related fungi
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The Case for Conservation
How sex chromosomes “older than dinosaurs” could help improve … complex plant genomes will lead his team to a similar sense of satisfaction. … This work was supported by NSF DEB-1541005 and start-up funds from UF to S.F.M.; microMORPH …
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Workforce Development & Education Outreach
The JGI aims to inspire more students to enter the STEM workforce by fostering an understanding of our role in … JGI-UC Merced internship program, a similar collaboration with AAMU was launched in 2024.  … The CalTeach Summer Research …
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