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Nikos Kyrpides
… Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development of the … S, et al. (2021) Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome. Nat Microbiol . … (2021) CheckV assesses the quality and completeness of metagenome-assembled viral genomes. Nature Biotechnol . …
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Finding the Fermenters
… 8,300 organisms from multiple sources, including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … browser that allows other researchers to study the genomes and predict the metabolic abilities of these … This work was supported by the United States Department of Agriculture National Institute of Food and …
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Giant Virus Infection Signatures Are Modulated by Euphotic Zone Depth Strata and Iron Regimes of the Subantarctic Southern Ocean
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Tina Clarke
… Ms. Clarke joined the Lab in 2007 as the Sr. Human Resources Division Partner for the Joint BioEnergy Institute (JBEI) and in 2017 joined the Joint Genome Institute (JGI). Tina serves in an HR advisory role … present Sr. Compensation Analyst, May 2015 –  present Joint Genome Institute (JGI) HR Partner, June 2017 – present …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… Berkeley, UC Agriculture and Natural Resources (ANR), US Department of Agriculture P­­lant Gene Expression Center, … Laboratory, and the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … For that reason, its genome was sequenced by the JGI in 2009 and it is considered to be a Flagship Plant. By …
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A Complex Confection Decoded: Sugarcane Reference Genome
… was the last major crop without a reference quality genome and now crop researchers can work toward advancing … for International Development (CIRAD), and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE … partly enabled by the JGI’s Community Science Program; in 2018, a monoploid reference sequence of sugarcane …
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JGI Scientists Pen Genome Watch Articles
… Microbiology column last year — and there’s more to come in 2020. Researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is … and reinforced by the  Fort Lauderdale Agreement (2003), the JGI recognized the need to engage the community … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… of California, Riverside and Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … much damage to the hosts, but they are carriers of several viruses (e.g., Lettuce big-vein associated virus LBVaV; …
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Cataloging the Microbes that Manage the Health of River Systems
… Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds … National Laboratory. The JGI sequenced over 1,000 metagenomes and established standardized sequencing protocols so … also provided several access points for these datasets. As part of a larger microbiome data integration hub, these …
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Decomposing a San Francisco estuary microbiome using long-read metagenomics reveals species- and strain-level dominance from picoeukaryotes to viruses
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Annual Genomics of Energy & Environment Meeting
… Thank you for joining us at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of …
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