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A Model System for Perennial Grasses
… Panicum hallii genomes offer insights to drought tolerance. The Science Researchers have developed a genomic model to study drought tolerance in perennial grasses using Panicum hallii (Hall’s panicgrass), by generating two … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… Meta-omics datasets show that CRISPR-Cas systems determine mutualism or parasitism between some archaeal hosts and … interactions are difficult to study in the lab. Metagenomics provides new views of these relationships.  Recently , researchers used population genomics to find that while archaeal hitchhikers may often …
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Comparative transcriptomics of CAZy enzymes in white- and brown-rot agaricomycetes: Evolutionary insights into lignocellulose degradation and the relevance of GH16 glycoside hydrolase functional divergence
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have … for an encyclopedia of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would … along with 100 of his colleagues in the comparative plant genomics community. The project’s aim is to generate …
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Natural Prodcast Episode 17: Cassandra Quave
… is Professor Cassandra Quave from Emory University, with joint appointments in the School of Medicine and College of Arts and … that morning cup of coffee, that is a plant that has a functional activity. It’s a pharmacological agent that acts … Dr. Cassandra Quave, from Emory University’s School of Medicine and College of Arts and Sciences in Atlanta. She is a …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… Researchers from the JGI recognized for their “significant influence in their chosen field or fields through the … the October issue of Nature, the study highlights the vast functional diversity of microbes by looking at protein … as a Nature Microbiology study that leveraged population genomics to investigate archaeal hitchhikers and found that, …
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Dan Rokhsar
… Dr. Rokhsar joined the JGI in 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed towards … animal genomes. He currently leads the JGI’s Computational Genomics group, and is past lead of the Eukaryotic Genome …
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Crysten Blaby-Haas
… Dr. Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials Initiative, a … working with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in bacteria and leveraging … Handling Editor, Journal Experimental Botany, 2022 – present …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… Survey of Setaria's natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth … (Danforth Center) drove up and down the highways of the continental United States, occasionally pulling over to the side of the road to collect small weedy …
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JGI-UC Merced Interns Share Their 2021 Experiences
… During the summer of 2021, 13 interns from UC Merced spent eight weeks working virtually … the goal of inspiring students to embark on a career in genomics and to help foster a diverse future workforce in … Blurring the Line Between Plasmids and Phages … Evolution of the Mitochondria Internship …
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part … of community-building efforts in the field of viral ecogenomics. For this role, Dr. Roux can rely on more than 10 … B.S. in Microbiology, Université Blaise Pascal, France M.S. in Data Analysis and Modeling for Life Sciences, Université …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… A two-day kick-off meeting held at Lawrence Berkeley National Laboratory (Berkeley … the aim of intensifying collaborations in the fields of genomics, structural biology, bioimaging, and water … development to study active sites or single cells in their functional aqueous environment.  During the tours through …
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