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A Collaboration to Improve Plant Genome Annotations Across Species
… of RNA molecules transcribed from all the genes within a cell or tissue at a specific time or under specific … resource like this important to the field of plant genetics/genomics? Avinash: Having a better handle on the gene … handling 18 different species is beyond the capacity of a single lab. Growing different species poses significant …
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Protocol for single-cell isolation and genome amplification of environmental microbial eukaryotes for genomic analysis
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Microbial co-habitation and lateral gene transfer: what transposases can tell us
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JGI Early Career Researchers Featured in mSystems Special Issue
… beyond the tried-and-true method of traditional shotgun metagenomics. One approach uses fluorescence-activated cell sorting (FACS) to sort cells into several small pools … sequence reads to link mobile elements such as plasmids to microbial host cells. In a separate article, research …
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Toward More Efficient Artificial Photosynthesis
… cycle. The Science Chloroplasts are the factories in plant cells. Using photosynthesis, they take raw materials … a platform that mimics chloroplast function within a cell-sized system. The Impact Photosynthesis harnesses … Lab). Supporting the Erb lab through the CSP Functional Genomics call, the JGI synthesized library of genes that …
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Tracking the Origins of Methane-Producing Microbes
… recent studies now suggest the gene cluster predates this microbial group. Recently published in the Proceedings of … these samples by sorting the microbes into small pools of cells that were then sequenced separately. From these … more with JGI Microbial Program head Tanja Woyke and her Single Cells team member Frederik Schulz to screen the …
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Natural Prodcast Episode 22: Alison Narayan
… can it actually turn over? ALISON NARAYAN: So that’s an excellent question. I think that we need enzymes with good … thanks so much for talking to us today. This is really an excellent conversation. I’m so happy we did this. ALISON …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
Ben Cole, a project scientist in Visel’s Genomics of Plant-Microbial Interactions Group who has mentored several of the … Jess Jarett, a postdoctoral fellow in Tanja Woyke’s Single Cells Group who mentored 2018 intern Akshay Paropkari, …
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Large-scale contamination of microbial isolate genomes by Illumina PhiX control
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The integrated microbial genomes system: an expanding comparative analysis resource
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Fifteen years of microbial genomics: meeting the challenges and fulfilling the dream
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The genomic standards consortium: bringing standards to life for microbial ecology
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