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Gut Fungi: Unexpected Source of Novel Chemicals
… called natural products . Yet, combing through the genomes of four anaerobic fungal species has revealed, for … whip up dozens of complex natural products, including new ones. The Impact In the past, natural products have been an … of natural products. In the lab, O’Malley and her team — notably, first author Candice Swift — verified that the …
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JGI announces final round of 2022 Functional Genomics awardees
… and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the final six …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… weeks of tricky, laborious lab work to analyze samples from one experiment. Starting a  few years ago, researchers can … proposal calls to the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … it was all about sharing ideas. All breakout sessions, just enough context to get people thinking and tackling some of …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… mentors, alumni, and other JGI staff, Mouncey explained: “One of the hallmarks of JGI is our diverse workforce and our … we recognize that workforce in genomics, including JGI, is not representative of the diversity in the population, … stages, so I can begin biological analysis of the data sooner than I anticipated.” In her message, Dumont reminded …
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Genome Sequence of Roseovarius sp. Strain MCTG156(2b) Isolated from a Phytoplankton Net Trawl on the Scottish West Coast
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Complete Genome Sequence of Desulfurococcus fermentans, a Hyperthermophilic Cellulolytic Crenarchaeon Isolated from a Freshwater Hot Spring in Kamchatka, Russia
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Genomic Comparison of Two Family-Level Groups of the Uncultivated NAG1 Archaeal Lineage from Chemically and Geographically Disparate Hot Springs
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Whole Genome Analyses Suggests that Burkholderia sensu lato Contains Two Additional Novel Genera (Mycetohabitans gen. nov., and Trinickia gen. nov.): Implications for the Evolution of Diazotrophy and Nodulation in the Burkholderiaceae
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Overview of the Genomes OnLine Database (GOLD)
… TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why curated metadata matters. …
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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct … from the warm, well-lit surface, to the blue-lit twilight zone, to the continuous pressure of the dark abyss, 4000 m … periodically at different depths. In order to determine the genome structure of SAR324 cells and their gene expression, …
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New Research Sheds Light on Diversity in the Deep Sea
… Scientists with the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … contributed metagenomic sequencing to the study as well as  genome analysis, providing authors a more complete picture … datasets are available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) portal. The study,  published …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along … in the environment — their sheer genetic diversity. As pioneers of this field, the JGI has leveraged metagenomics to … ecosystems all over the world, including 3,908 isolate reference DNA viruses and 264,413 computationally identified …
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