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Getting to the Bottom of Fungal Functions Across Earth’s Forests
Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … who nominated species for sequencing and then sent DNA and RNA samples to JGI,” Grigoriev said. All of these …
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Len Pennacchio
DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … … The Deputy of Genomic Technologies serves as the JGI’s primary point of contact for all High-Throughput Data Generation Platforms (Sequencing, Single Cell, DNA Synthesis, and Metabolomics) as well as Research & …
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Supercharging SIP in the Fungal Hyphosphere
… and fungi The Science Researchers have successfully automated aspects of a commonly-used process for studying … isotope to it. The isotopes are incorporated into the DNA of specific microbes who consume the labeled food or … HT-SIP is a capability available to request through  the JGI proposal calls . … Work at Lawrence Livermore National …
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Environmental Genomics Group
… approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop … Clum, A. et al. (2021)  DOE JGI metagenome workflow …
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A Journey Through the Evolution of the Mitochondria Internship, A Sequential Read
Greetings my esteemed reader, you’re reading this because either you are serendipitously … here by accident or else are interested in participating in the famous JGI-UC Merced internship program. …
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Genetic Associations in Four Decades of Multienvironment Trials Reveal Agronomic Trait Evolution in Common Bean
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Characterization of four endophytic fungi as potential consolidated bioprocessing hosts for conversion of lignocellulose into advanced biofuels
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Genome sequences of four novel Endozoicomonas strains associated with a tropical octocoral in a long-term aquarium facility.
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Genome sequencing of four Aureobasidium pullulans varieties: biotechnological potential, stress tolerance, and description of new species
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Forming Scientific Connections and Building Community
The 11th cohort of JGI-UC Merced interns pick highlights from their summer … DOE Office of Science User Facility, hosted three undergraduates and seven graduate students from UC Merced through … experiences and what they’ll take with them as they go forward in their careers.   Listed below are the interns, …
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Sequencing Technologies
Group applies cutting edge molecular capabilities and state-of-the-art next-generation sequencing to enable biological discovery by the JGI and external DOE users. Adopting the latest  sequencing … significantly lowering costs. Staff process samples, perform quality checks, and prep libraries for sequencing. They …
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The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification
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