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Benjamin Cole
… Prior to joining the Joint Genome Institute, his focus was primarily on how plants interpret different light … day. At the Joint Genome Institute, Dr. Cole’s research focus has been on understanding how microbes can colonize plant … environment using emerging single-cell characterization technologies (scRNA-seq, Spatial Transcriptomics). …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Science In a recent  Nature Genetics paper , researchers focused on the full composition of genes, or pangenome, of the … plant lineages makes it ideal for comparative genomics studies, offering insight into genes critical for … Summary As the planet has changed, so have plants. Curious about their ability to adapt to changing environments, …
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JGI@25: From Life at the Extremes to Editing Genomes
… led by Nikos Kyrpides , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense collection … ecosystems around the world, conducting iterative searches using statistical analyses to continuously refine and … and Management.” So begins a passage from Doudna’s book about her meeting with Banfield. (Banfield’s recounting of …
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UC Merced Interns Reflect on Their JGI Summer Projects
… skills as well as build their network in the field of genomics and scientific research. The topics students worked … wide — from implementing new data visualization tools, to using natural language processing techniques to categorize genetic information. Learn more about their work here in a series of videos produced by JGI …
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Graduate Students Get Thesis Research Opportunity at the JGI
… at one of the DOE national laboratories or national user facilities. As a result of the latest call , a total of … is Mo Kaze, part of the 2018 cohort of the JGI-UC Merced Genomics Internship Program. Kaze is part of Mark Sistrom’s … UC Merced School of Natural Sciences. “I’m deeply concerned about climate change and this is a remarkable opportunity to …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… the aim of intensifying collaborations in the fields of genomics, structural biology, bioimaging, and water … UDE familiarized themselves with the research programs and user facilities at Berkeley Lab. Commenting on the visit, JGI Director Nigel Mouncey expressed enthusiasm about the potential of this collaboration stating, “We …
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Cultivating Symbiotic Antarctic Microbes
… to carbon cycling, and is interested in understanding the genomic basis and ecological consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental … researchers have been able to gain further insights about how microbes have adapted to thrive in polar …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… From August 21-23, 2023, attendees joined the JGI Annual Genomics of Energy & Environment Meeting.  A wide array of … — and ongoing — scientific career, he shared his excitement about tackling a number of challenges. Working with students … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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An Earth Month Look at Sustainability Efforts at the JGI
… Sustainable Berkeley Lab maintains a  calendar of Earth Month … Members from across Berkeley Lab gathered to learn more about planting and tending these shoots of their own. The … is a very good club to join.” Interested in learning more about the Sustainable Garden Club at LBNL? Submit this form  …
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JGI Launches Latest Strategic Plan
… sequence to the public data repositories over its now 20-plus-year history. In 2019, the countdown has begun to the June dedication event of the Integrative Genomics Building—the new home of the JGI and KBase in the … prospective partners to generate awareness of and clarity about the JGI’s strategic directions,” said Mouncey. “In …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… Kaushal Sharma, one of five Antioch High School rising juniors … Database (GOLD) administered by the DOE JGI. T.B.K Reddy, Kaushal‘s mentor, described his student’s contributions as … tasks we assigned.”       Click here to watch a video about the Biotech Partner summer interns at the JGI. What …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… genetic blueprint has long been a significant challenge in genomics. Enter GenomeOcean, a powerful generative model  … now available to the global research community able to not just analyze but also create DNA sequences mimicking an array … sequences based on the principles it learns from the data about genetic structure — carrying with it the potential …
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