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Biochemical characterization of Fsa16295Glu from “Fervidibacter sacchari,” the first hyperthermophilic GH50 with β-1,3-endoglucanase activity and founding member of the subfamily GH50_3
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… are often very different than those bred for Texas. Identifying and breeding varieties that have high productivity … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … he added. Jeremy Schmutz , head of the  JGI Plant Program , drew parallels between these  common gardens and …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
Hear more about what they learned from working with their JGI mentors, what challenges they overcame, and what new … Ruoxi Zhao and mentor Margot Bezrutczyk Eric Wu and mentor Atif Shahab Edward Lu and mentor Miguel Romero Sean Saki and … valuable because in this time that I’ve been in my PhD program, I’ve been really focused with academia. And so this …
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Frederik Schulz
… and biogeochemical cycles. He provides his expertise to the JGI user community and supports various user projects in the Microbial Program. In an LDRD-funded project, Dr. Schulz established a … dimictic lake. Microbiome . Camargo A. et al. 2023. Identification of mobile genetic elements with geNomad. Nature …
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Environmental Genomics Group
… on using genome-resolved metagenomic approaches to identify and characterize genomic information from uncultivated … Clum, A. et al. (2021)  DOE JGI metagenome workflow …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
On February 17, 2021, JGI and the Environmental Molecular Sciences Laboratory … Integrating Collaborations for User Science” (FICUS) program. Letters of Intent are due March 17, 2021. Q&A from … and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s Office of …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … yet,” said Igor Grigoriev, Fungal Genomics Program Head at the JGI.  Along with an improved … and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s Office of …
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Nikos Kyrpides
Joint Genome Institute in 2004 to lead the Genome Biology Program and the development of the comparative analysis … genomes and metagenomes (IMG). He became the Metagenomics Program head in 2010 and has the combined Microbial Genomes … Nature . 622(7983):594-602. Camargo AP. et al. (2023) Identification of mobile genetic elements with geNomad. Nat …
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Disclaimer
… any statement of authorship are reproduced on all copies. JGI is not responsible for the contents of any off-site …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
JGI-led team significantly expands the global diversity of … senior author  Tanja Woyke , who heads JGI’s  Microbial Program . The team mined more than 8,500 publicly available … filter the data for the major capsid protein (MCP) to identify NCLDV viruses. JGI researchers previously applied this …
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The More the Merrier: Making the Case for Plant Pan-genomes
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the study, partly enabled by the JGI’s  Community Science Program , the team generated reference genomes for  B. … two  B. hybridum types don’t interbreed. “Preliminary artificial crossing experiments between ancestral and recent  …
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David Goodstein
… equipment manufacturer KLA-Tencor before joining the JGI in 2002. Initially focused on building tools to … expert curation of human gene models in support of JGI’s contributions to the Human Genome Project, he began …     Nucleic Acids Research 40, D1178. Publications … Scientific Advisory Board member, InterMine (www.intermine.org) … …
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