The standard operating procedure of the DOE-JGI Metagenome Annotation Pipeline (MAP v.4)
Results
Hydrothermal Vents and International Science: A Postdoc’s Visit to the JGI
Phylogenetic and phylogenomic overview of the Polyporales
Sequencing and functional validation of the JGI Brachypodium distachyon T‐DNA collection
JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
MicroSyn: A user friendly tool for detection of microsynteny in a gene family
Global overview and major challenges of host prediction methods for uncultivated phages
DOE JGI Metagenome Workflow
Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
Coming-of-Age Characterization of Soil Viruses: A User’s Guide to Virus Isolation, Detection within Metagenomes, and Viromics
Philympics 2021: Prophage Predictions Perplex Programs
JGI Portals
