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Benjamin Cole
… Dr. Cole is interested in studying how plants interact with their environment. Prior …
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Scaling Up Existing Skill Sets
… graduate student Mentors: Igor Grigoriev and Asaf Salamov, Fungal and Algal Program What effect has your summer internship with … During my internship, I got to work with an enormous set of fungal genomics data. For me, it was an opportunity to adapt …
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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal genomes. The Science In a proof-of-concept study, … including biofuel production. Efforts such as the 1000 Fungal Genomics Project led by the DOE Joint Genome … National Laboratory, aim to improve our understanding of fungal diversity by sequencing genomes from across the …
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Genome‐wide association studies and expression‐based quantitative trait loci analyses reveal roles of HCT2 in caffeoylquinic acid biosynthesis and its regulation by defense‐responsive transcription factors in Populus
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Conserved genomic collinearity as a source of broadly applicable, fast evolving, markers to resolve species complexes: A case study using the lichen-forming genus Peltigera section Polydactylon
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Green Algae Reveal One mRNA Encodes Many Proteins
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JGI Scientists Pen Genome Watch Articles
… researcher Sara Calhoun, data scientist Stephen Mondo, and  Fungal and Algal program lead Igor Grigoriev took readers on a quick …
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JGI User Executive Committee Expands
… feedback on pangenome tool development. Maurice is a fungal evolutionary ecologist with interests in … Investigator proposal to understand the genetic basis of fungal community assembly on dead wood decomposition. She’s also participated in the 1000 Fungal Genomes Project and has an interest in …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… dataset was particularly important for characterizing fungal genes, because, unlike bacteria, they often carry … sequences, as well as individual reference fungal genome sequences assembled as part of its 1000 Fungal Genomes Project . To map microbial activity, …
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JGIota: Looking Back at Methane-Making Microbes
… matter. So since 2010, the JGI has supported researchers studying those microbial methane-makers. Eventually, that …
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Introducing New Members of the JGI User Executive Committee
… cellular phenotypes and genotypes. Pawlowska, who studies fungal-bacterial symbiotic systems, noted that she would … ecological and evolutionary factors shaping the assembly of fungal endophytes across land plants and lichens, mentioned …
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MycoCosm Tutorial
… Learn more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with …
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