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… Matt is broadly interested in the interactions between microbial life and environment, and using metagenomics to study these complex natural systems. Microbial …

… Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the Joint Genome Institute, his focus was … on understanding how microbes can colonize plant roots, focusing on genetic components required for effective … University of California, San Diego (PhD, 2011) Rensselaer …

… Sequence-based studies — from metagenomics to single-cell … detecting giant viruses in sequence data is read-mapping: using giant virus reference genomes to search for giant … This work was conducted by the US Department of Energy Joint Genome Institute, a DOE …

… From August 21-23, 2023, attendees joined the JGI Annual Genomics of Energy & … and environment challenges. The JGI offers these solutions to the worldwide scientific community through its  User … Newman’s work here . Edward Holmes, University of Sydney Using protein structures to assess scope of the virosphere …

… For the first time in several years, the DOE Joint Genome … and determination as they came onsite. From data carpentry to science communications, their schedules were filled with … Hualan Liu, Building Expression Host in Bacilli Class using CRAGE Technology Emerald Nash and mentor Jonelle …

… Nov. 2: Getting Credit for Scientific Contributions of Any Size What is considered to be a scientific contribution? This session will … Attendees will learn how to identify their contributions using the Contributor Roles Taxonomy and what sorts of …

… Gary Trubl, a virologist and postdoc at Lawrence Livermore National Laboratory, is using bioinformatics and isotopes to track how viruses …

… The focus of this group, in recent years, has been to bring generalizable technologies to bacteria, yeasts and algae previously with little to no … For further details, please reach out to the Group Lead …

… Software engineers in the Synthetic Biology Informatics Group … gRNA-SeqRET , an organism-agnostic CRISPR gRNA design tool BOOST , which provides a suite of tools to automate sequence design for assembly by Gibson, … For further details, please reach out to the Group Lead …

… Kelly Wrighton and her group at Colorado State University in … sequencing the world’s river microbiomes. And they’re using team science to do it.   …

… Dr. Louie joined the JGI in 2014 to develop the metabolomics … capabilities and product offerings for JGI users.  Using cutting-edge mass spectrometry-based techniques, the … B.S in Biomedical Engineering, Johns Hopkins University; Ph.D. in … M, Louie KB, Mueller M, et al. Regulation of Oxygenic Photosynthesis during Trophic Transitions in the Green Alga …

… Sorghum genome serves as a reference for the highly complex sugarcane … “polyploid”) and their complex genomes are more difficult to sequence and assemble, in turn limiting the use of … successfully assembled a first monoploid reference sequence using a targeted approach that focused on the gene rich part …