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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… of 100 times the size of what has typically been associated with viruses, while the genomes of large viruses may be only … proteins, and virus diversity in this group expanded 10-fold from just 205 genomes, redefining the phylogenetic tree … environmental conditions. Function prediction on the 2,000 new giant virus genomes led the team to uncover a prevalence …
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Rex Malmstrom
… in situ functional activities of specific microbial groups within complex communities.  The Microscale Applications … molecular protocols.  Finally, his team utilizes new technologies, e.g. acoustic liquid transfer and … dissertation in life sciences 2006 … Education … Selected Publications … Awards and Honors …
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Three Join the JGI User Executive Committee
JGI User Executive Committee (UEC) recently welcomed three new members earlier this month – Sneha Couvilion of Pacific … lead on PNNL’s Soil Microbiome SFA. She serves as Secretary within the Microbial Ecology Section of the Ecological … early career success, and is currently a PI for both CSP New Investigator and large-scale CSP projects. Wilbanks has …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… said Susannah Tringe, JGI User Programs Deputy. “These new CSP projects accelerate our efforts to characterize … poorly-studied algal and viral genomes, and integrate with key DOE Office of Biological and Environmental Research … diCenzo’s proposal is also notable as he had an accepted new investigator proposal last year, and he noted that the …
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Forming Scientific Connections and Building Community
… workshops, data carpentry hackathons, and also made new friends while working on their summer projects. Watch … had to say about their experiences and what they’ll take with them as they go forward in their careers.   Listed … Kirton Project: “ Streamlining computational studies of misfolding proteins via high performance computing ” Erika …
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JGIota: Looking Back at Methane-Making Microbes
… and wool. Hear more from JGI collaborators Sinead Leahy (New Zealand Agricultural Greenhouse Gas Research Centre) and …
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Gotta Catch 'Em Gall
Berkeley and the Joint BioEnergy Institute) are looking for new ways to engineer plants. So they’ve looked into wasps … hear from Kasey and Patrick about how this project unfolded, and how they worked with the JGI's metabolomics program to find out more about …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… book featuring polar bears in winter scenes that came with crayons in various shades of white. To researchers … samples around the world, resulting in a five-fold increase of RNA virus diversity. “The world of viruses … higher-level classifications of virus groups (phyla.) The new sequences are filling in some gaps on existing virus …
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Building Sphagnum Genomic Resources
… decomposed matter, and researchers estimate that they hold about 25 percent of the world’s soil carbon. In high … up nearly 3 percent of the earth’s land surface. In the New Phytologist, researchers led by David Weston of Oak … These resources would provide the research community with the ability to address questions such as sphagnum’s …
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Enlarging Windows into Understanding Gene Functions
… workflow that reduces the time and cost associated with this purification step, and Baumgart continued and … factors have been repurposed during evolution to control new functions,” O’Malley said. “Combining the two approaches … understand known biological functions as well as discover new functions. To help drive JGI User science we have …
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Annual Genomics of Energy & Environment Meeting
DNA sequencing, synthesis, metabolomics, data analysis, and new technology developments – that the JGI offers through …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address … carbon into soil and boosting biofuel feedstocks with less fertilizer. For millions of years, underground fungi have lived in symbiosis with plant roots. Plants provide photosynthesized carbon, …
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