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PR-PR: Cross-Platform Laboratory Automation System
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of … relied on methods that eschew culturing, painting a more systematic picture through single-cell and metagenomic … virus had been infecting the cell. The team assembled 130 genomes from their sample — a small proportion of the …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my … build proteins. What Wint and her mentors discovered in the genomes helped to reinforce Charles Darwin’s “survival of … Wint said. “Fungi play an important role in the earth’s ecosystem,” said Salamov, one of Wint’s mentors and a data …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… The Sequence to Function: Applications and Analysis for the Future (SFA²F) meeting brings together established and emerging scientists from …
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The … the perennial grass Miscanthus sinensis has been published. Analysis of the genome sequence also provides insights into … Understanding the evolution of polyploidy, and how genomes respond to extra chromosome and gene copies, will …
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MycoCosm, the JGI’s Fungal Genome Portal for Comparative Genomic and Multiomics Data Analyses
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Marine Synechococcus isolates representing globally abundant genomic lineages demonstrate a unique evolutionary path of genome reduction without a decrease in GC content
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Development of an integrated transcript sequence database and a gene expression atlas for gene discovery and analysis in switchgrass (Panicum virgatum L.)
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Network Modeling of Complex Data Sets
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Effects of Polar Light Cycle on Microbial Food Web
… Populations of Antarctic lake microbial communities change with the seasons. The Science Light-harvesting bacteria (phototrophs) in Antarctica’s Ace Lake defy the … nutrient cycling that evolved separately from other similar systems, and offers new clues into a unique environment in …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… Survey of Setaria's natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth … Program , sequences of several hundred green millet plant genomes were generated, though the final analyses focused on … genome infrastructure with a reasonably accessible system,” said Schmutz. “Building the pan-genome and …
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acdc – Automated Contamination Detection and Confidence estimation for single-cell genome data
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