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… their expertise in developing and managing public viral genomics resources such as analytical tools and data … developing and maintaining the JGI’s  Integrated Microbial Genomics and Microbiomes (IMG/M) system. The Program aims to … track record of developing cutting-edge tools for viral genomics. Notable examples include CheckV , which assesses …

… 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed towards … IBM Watson Research Center, Yorktown Heights, NY … Publications … 2018 Marthella Foskett Brown Chair, … Genomics and Computational Biology … Education … Selected Publications … Awards and Honors …

… sort of homogeneous medium. In reality, it’s not — there is variation of nutrients, temperatures, and other … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …

… to conduct a similar type of search in microbial and metagenomic databases. In this case, the machine “learned” to … Simon Roux, a JGI research scientist in the  Environmental Genomics group . Training the Search Tool Inoviruses are … learned how an inovirus’ strategy of integrating itself within a host can lead to beneficial or antagonistic …

… pursue her research interests in microbial ecology and metagenomics. Her current research focuses on leveraging thousands of metagenomic datasets from host-associated and environmental … Futures … Metagenome Science Program … Education … Selected Publications … Awards and Service …

… that may be relevant to both algae and land plants.  Within the biogeochemistry group, one of the four proposals … omics and computational resources with JGI’s cutting-edge genomics, DNA synthesis and complementary capabilities. … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …

… has begun to the June dedication event of the Integrative Genomics Building—the new home of the JGI and KBase in the … 47-49). “Our hope is to circulate this document widely within the Biosciences Area and among our Berkeley Lab …

… sequencing, the researchers identified different cell types within  M. truncatula root cells, and profiled their gene … technique allowed them to understand gene expression within circular capture areas roughly 55-microns in diameter … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …

… sequencing, the researchers identified different cell types within  M. truncatula root cells, and profiled their gene … technique allowed them to understand gene expression within circular capture areas roughly 55-microns in diameter … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …

… working with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in bacteria and leveraging … Ware D, Blaby-Haas CE. (2024) Functional diversification within the heme-binding split-barrel family. J Biol Chem  … Google Scholar … Education … Awards and Service … Selected Publications …

A “bait and hook” single-cell genomic approach to bioprospecting. The Science One of the … cell sorting to sort cells into several small pools, followed by whole genome amplification and shotgun … this microbe. The work is an example of how function-driven genomics, which Woyke and her colleagues define as “any form …

… led by Nikos Kyrpides , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense collection of publicly accessible metagenomic datasets from a wide variety of ecosystems around … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …