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I-Min (Amy) Chen
Dr. I-Min A. Chen received her Ph.D. in Computer Science. Her … data modeling, and biological data management. She was one of the co-authors and key developers of the … in an Academic Setting, SSDBM 14, July 2014 … Selected Publications …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
In honor of the JGI's 25th anniversary in 2022, we have … with the HudsonAlpha Institute for Biotechnology. Publications Grimwood, J., Gordon, L., Olsen, A. et al. The DNA sequence and biology of human chromosome 19 . Nature. 428, 529–535 …
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Proteogenomic analyses indicate bacterial methylotrophy and archaeal heterotrophy are prevalent below the grass root zone
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Exploring Possibilities: 2022 JGI-UC Merced Interns
In this short video, UC Merced undergraduate and graduate … Clement Coclet and Simon Roux Tyrome Sweet and mentor Jonelle Basso Yumary Vasquez and mentor Juan C. Villada … other tools that I can use to, um, perform computational biology.  Eric Wu : From the internship I learned to work as …
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Alabama A&M Interns Access An Abundance of Knowledge
In 2024, the DOE Joint Genome Institute and Alabama A&M … part about interning here is the community aspect. Everyone here has also been so very nice and willing to lend a …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
JGI-led team significantly expands the global diversity of large and giant viruses. While the microbes in a single drop of water could outnumber a small city’s … Reprogramming a Common Strategy for Large and Giant Viruses Another significant finding from the study was a common …
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JGI Mural
The JGI mural on the 3rd floor of the Integrative Genomics Building whimsically references dozens … the science depicted. The two-story JGI mural was commissioned for the JGI’s 25th anniversary and done by …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
Researchers looked across many organisms to see that aminotransferase enzymes have evolved mix-and-match … look at how this enzyme family evolved across 90 species. “One unique thing about this work was our focus on all the …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … the same on an industrial scale to produce biofuels . Since one of the challenges of developing alternative fuels from … data supports higher education in this JGIota , a Genome Insider podcast minisode.)  “The ultimate target has shifted …
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Giant Virus Infection Signatures Are Modulated by Euphotic Zone Depth Strata and Iron Regimes of the Subantarctic Southern Ocean
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
In April 2020, we mark both the 50th celebration of Earth Day … to deal with hot and dry conditions could help us to one day develop plants that are more drought-tolerant. These … quest in a future episode of our JGI podcast, Genome Insider. I’m Alison Takemura. See you next time. … The U.S. …
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David Goodstein
With a background in experimental and computational surface physics, Dr. … Plant Pan-Genomics Comes of Age . Annual Review of Plant Biology 72, 411. Gordon et al., 2020.  Gradual polyploid … plant genomics.      Nucleic Acids Research 40, D1178. Publications … Scientific Advisory Board member, InterMine …
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