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Comparative genomics provides insights into the lifestyle and reveals functional heterogeneity of dark septate endophytic fungi
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IMG/M v.5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes
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Comparative Genomic Analyses of Cellulolytic Machinery Reveal Two Nutritional Strategies of Marine Labyrinthulomycetes Protists
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … with the HudsonAlpha Institute for Biotechnology.   Publications Grimwood, J., Gordon, L., Olsen, A. et al. The … J., Martin, J., Terry, A. et al. The DNA sequence and comparative analysis of human chromosome 5. Nature. 431, …
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Uncovering Novel Genomes from Earth’s Microbiomes
… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the study of the microbial communities in the … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Better Genome Editing for Bioenergy
… A team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in … tool will make the right cut, researchers created a set of guide RNAs that were effective against 94 percent of the … genes that led  Y. lipolytica to overproduce lipids — an important phenotype for biofuel production. They identified …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden understanding of the terpene synthase gene family across eucalypt … environmental interactions. Terpenes are also economically important because of their use in industrial materials, … Sequencing and assembly data carried out by EMBRAPA as part of the  Corymbia  genome project was supported by FAPDF …
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference … whose evolutionary history and perennial lifecycle makes it important to study directly. The large and complex genome of … Innovation, which is supported by the U.S. Department of Energy, Office of Science, Office of Biological and …
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JGI & KBase at PAG XXVII
… how you can use the KBase system to accelerate your plant genomics research. Click here to download a list of talks relevant to JGI science at PAG XXVII. On January … and Joint Genome Institute Plant Program Update 6:33 PM Comparative Genomic and Transcriptomic Analyses for …
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Refined annotation and assembly of the Tetrahymena thermophila genome sequence through EST analysis, comparative genomic hybridization, and targeted gap closure
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… The JGI was honored to host some of the brightest minds in genetics as part of our  2022 … hybrid event, with guests joining onsite at the Integrative Genomics Building at Lawrence Berkeley National Laboratory … over thousands of square kilometers, and that’s hugely important – serving as half of the photosynthetic activity …
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Comparative plastome genomics and phylogenomics of Brachypodium: flowering time signatures, introgression and recombination in recently diverged ecotypes
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