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Statistical analysis of feature-based molecular networking results from non-targeted metabolomics data
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JGI on the 2021 Highly Cited Researchers List
… Congratulations to the 2021 Highly Cited Researchers at the JGI! They are among those recognized by Clarivate Analytics for demonstrating “significant influence in their chosen field or fields through the publication of multiple highly cited papers during the last …
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Len Pennacchio
… In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular … his Ph.D in 1998 from the Department of Genetics at Stanford University where he uncovered the genetic cause of a … Len Pennacchio is the JGI's Deputy of Genomic Technologies. oClick …
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The More the Merrier: Making the Case for Plant Pan-genomes
… Brachypodium model system traces polyploid genome evolution. … Laboratory (Berkeley Lab), relied on a model grass system for answers. Their work  recently appeared in  Nature … of the polyploid reference line is simply not true based on previous pan-genome studies. Thus, we must compare …
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Association of functionally significant Melanocortin-4 but not Melanocortin-3 receptor mutations with severe adult obesity in a large North American case–control study
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Mining Metagenomes for Cas Proteins
… Cas14 proteins discovered from JGI’s IMG/M database and … led by Jennifer Doudna’s group at the University of California (UC), Berkeley, which is also affiliated with … The results yielded several CRISPR-Cas systems, and based on several experiments conducted by Doudna’s lab at UC …
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Game On: High School Students Drive Everglades Metagenomics Study
… In late June, Kathleen Lail, a member of JGI’s Sample Management … out to many researchers with the hope of getting support for a research project for his class of 18 juniors.  He got … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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DAP-seq Drives Robust Mapping of Gene Regulation
… Multi-species assays yield an unprecedented view of plant evolution and … intricate network of regulatory “switches” in plants at a large scale was akin to trying to chart every electrical … advancement holds the potential to expand opportunities for bioenergy and bioengineering applications. “We worked …
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Refinement of the “Candidatus Accumulibacter” genus based on metagenomic analysis of biological nutrient removal (BNR) pilot-scale plants operated with reduced aeration
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A Step Toward Controlling Soybean Rust
… The United States  is the world’s leading soybean producer , and soybeans … , Sebastien Duplessis of the French National Institute for Agricultural Research (INRA)  proposed sequencing a … JGI Flagship plant genome , and JGI  published its genome sequence in 2010.       …
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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