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JGI Announces 2023 Community Science Program Awardees
Congratulations to the proposers of the 19 proposals selected for the 2023 Community Science Program call of the U.S. … by these PIs will address a broad diversity of important scientific questions relevant to the DOE mission, and we …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI … Applications group at the JGI, whose team uses a semi-automated, standardized process to carry out the onerous SIP … and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s Office of …
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JGIota: A Biofuel Breakthrough in Anaerobic Fungi with Michelle O'Malley and Tom Lankiewicz
Michelle O’Malley and Tom Lankiewicz of UC Santa Barbara discuss the importance of studying … anaerobic fungi, as well as a recent discovery that turns scientific presumption on its head and opens up a new avenue to explore for efficient biofuel production. …
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UC Merced Interns Reflect on Their JGI Summer Projects
Over the course of eight weeks this past summer, 10 students from UC Merced … as well as build their network in the field of genomics and scientific research. The topics students worked on ranged … language processing techniques to categorize genetic information. Learn more about their work here in a series of …
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JGI Hosts GPU Hackathon in May
… in graphical processing unit (GPU)-based high-performance computing resources, an upcoming hackathon led by … Computing Facility (OLCF), NVIDIA, and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … we need to keep pace with changes in industry/DOE Advanced Scientific Computing Research (ASCR) facilities. It’s a …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… to global oceans. Through the Community Science Program of the U.S. Department of Energy (DOE) Joint Genome … Nearly 200 Terabases of data are expected to be generated for the accepted proposals, said Susannah Tringe, JGI User … and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s Office of …
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Four principles to establish a universal virus taxonomy
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
The Sequence to Function: Applications and Analysis for the Future (SFA²F) meeting brings together established … industry, and government organizations for three days of scientific presentation, interactive panel discussions, …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… to advance foundational science, creating opportunities for the global research community. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released … range of new tools and capabilities to support their scientific investigations of biological and environmental …
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Making a Lichen Together
For the first time, a team analyzes the transcriptomes of a … Facility. Grigoriev and his team at the JGI contributed to annotation of the genomes, available online at  PhycoCosm …
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Enlarging Windows into Understanding Gene Functions
… in sequences affect traits. In a text file, the rows of letters A, T, C and G appearing over and over in a … array of combinations, are unremarkable, save perhaps for the absence of all the other letters of the alphabet. … and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s Office of …
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Kjiersten Fagnan
… subsurface flows, and evolved into scalable methods for scientific data analysis. In 2014 Dr. Fagnan became the … closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in … … About the JGI Chief Informatics Officer … Selected Publications … Awards and Honors …
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