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Genome‐wide association studies and expression‐based quantitative trait loci analyses reveal roles of HCT2 in caffeoylquinic acid biosynthesis and its regulation by defense‐responsive transcription factors in Populus
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JGI Accepts 17 Proposals for Community Science Program
… (Berkeley Lab). They were selected through peer review from 41 full proposals out of 50 letters of intent submitted. … on harnessing genomics to developing sustainable resources for biofuels and bioproducts. Andrew Nelson of the Boyce … aims to redesign and engineer algae by identifying the algal regulators that could boost lipid production. In their …
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A Model System for Perennial Grasses
… Panicum hallii genomes offer insights to drought tolerance. The Science … U.S. Department of Energy (DOE) supports research programs for developing methods for converting plant biomass into … var. hallii (99.2% complete) and P. hallii var. filipes (94.8% complete) and resequenced a host of natural collections …
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The exceptional form and function of the giant bacterium Ca. Epulopiscium viviparus revolves around its sodium motive force
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Genome Analysis of Planctomycetes Inhabiting Blades of the Red Alga Porphyra umbilicalis
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Genomic Analysis of Organismal Complexity in the Multicellular Green Alga Volvox carteri
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Targeted genetic manipulation and yeast-like evolutionary genomics in the green alga Auxenochlorella
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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JGI Early Career Researchers Featured in mSystems Special Issue
… what the next five years of innovation could look like. In one article, Micro-Scale Applications head Rex Malmstrom and … sorting (FACS) to sort cells into several small pools before sequencing to recover rare microbes. The technique was … processes. A third approach steps away from reconstructing genomes directly from the environment and focuses on …
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Four chromosome scale genomes and a pan-genome annotation to accelerate pecan tree breeding
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Tracking the Origins of Methane-Producing Microbes
… on the global carbon cycle. All methanogenic archaea use one of three pathways for methanogenesis: hydrogen-dependent and CO2-reducing, or … separately. From these samples, 111 metagenome-assembled genomes (MAGs) were recovered, most of them archaea. The … address some of the most pressing challenges of our time. For more information, please visit  …
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Draft genome of Paraburkholderia caballeronis TNe-841T, a free-living, nitrogen-fixing, tomato plant-associated bacterium
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