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Finding New Cell Wall Regulatory Genes in Populus trichocarpa Using Multiple Lines of Evidence
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Soil virus offers insight into maintaining microorganisms
… identified a virus protein tied to carbon cycling.  The Science Through a collaborative effort, researchers have … of crystalized samples cloned and synthesized by the JGI, scientists have begun the complex process of uncovering the … second only to cellulose.  Chitin is also a common food source for microbes living within soil. So, the chitosanase …
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Gut Fungi: Unexpected Source of Novel Chemicals
… expensive feat thought to be too costly for them. The Science Anaerobic fungi, which die in the presence of … can breathe oxygen — just like we do. Oxygen is a rich source of energy, and because anaerobic fungi can’t harness it, scientists long held that these fungi don’t have the energy …
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Genome Project Standards in a New Era of Sequencing
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New voyages to explore the natural product galaxy
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The birth of new exons: Mechanisms and evolutionary consequences
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JGI Workshops at 33rd Fungal Genetics Conference
… Wednesday, March 18: "Genomics of Environmental Opportunism: Fungal Adaptation at the Edge of Pathogenicity" Workshop Steven Ahrendt presenting  Friday, March 20: JGI-EMSL Workshop: "Toward 10,000 Fungal Genomes and …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… genes drive resilience when salinity fluctuates. The Science The Arctic microalga Plocamiomonas psychrophila can … recorded. Samples were taken again at two, six, 12 and 24 hours. By the 24-hour mark, these algae showed significant … increased nutrient uptake and decreased cell death.  Scientists then extracted RNA to analyze gene expression, to …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… For bacteria, that salty, slightly stinky air is a rich source of the sulfur they need to grow and divide. Similar to … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, and incredibly complex — … secondary metabolites and associated genes are great resources for bioremediation, new agricultural applications or … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Programs & Platform Leads
… As an Integrative Genome Science User Facility, the JGI plays a leadership role in providing genome science capabilities to support BER's mission of achieving a predictive understanding of complex …
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Kjiersten Fagnan
… Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, … closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in 2016, and in 2018 was hired to be the JGI’s Data Science and Informatics department head.  Dr. Fagnan is also …
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