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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… data, a new JGI tool more accurately facilitates microbial genome discoveries. Unlocking the intricate … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … the human language—are well positioned to help enhance our understanding of life’s genomic code, advancing DOE …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… (MBIB) Division, and Energy Storage & Distributed Resources Division at Berkeley Lab.  Building on the momentum … from UDE familiarized themselves with the research programs and user facilities at Berkeley Lab. Commenting on … single cell and systems biology, omics, and big data science, machine learning for experimental science, energy …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… and management best practices that have advanced the microbial sciences. The Prize also recognizes innovative and impactful analysis of microbiome data that has changed our understanding of the microbiome and the microbial …
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Silver age of GOLD introduces new features
… Genomes OnLine Database celebrates 25 years as a vital resource for data contextualization The Science Since its launch 25 years ago, the  Genomes OnLine … are accessible on JGI data portals including the Integrated Microbial Genomes & Microbiomes (IMG/M) system, enhancing …
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High‐resolution genetic maps of Eucalyptus improve Eucalyptus grandis genome assembly
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… metabolites for multiple applications. The planet’s microbial diversity is immense, yet much of it remains … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … DSMZ overall, resulting not only in a valuable sequence resource to complement DSMZ’s vast strain resource, but also …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, has discovered that the candidate … evolutionary consequences. A previous study conducted by our research team surveying the genomic and phenotypic … When viewing the full distribution of switchgrass on a map, these 8X individuals occurred in parts of the …
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Analyze Data
… new research questions that span domains. We also work with our partners to build infrastructure in support of new …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… more complete genomic results from single cells. The Science Studying the  genomes of microorganisms is … incredibly useful for understanding the microbiome of the earth, but most species do not grow easily in the lab. To … key to better understanding all the organisms that live in our immediate microbiome. The U.S. Department of Energy …
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The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4)
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… and other traits when migrating back to the ocean. The Science Scientists have discovered flagella in an unexpected … to spring. These biodiversity hotspots harbor specialized microbial communities living in extreme conditions. The … in oceans or soils.  A recent study published in  The ISME Journal     focused on a class within  Chloroflexota called  …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, and incredibly complex — … secondary metabolites and associated genes are great resources for bioremediation, new agricultural applications or … studied in plant research laboratories and plant biology courses across the globe for insights into reproductive, …
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