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Polar Phytoplankton Need Zinc to Cope with the Cold
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Berkeley National Laboratory (Berkeley Lab) through the JGI Community Science Program (CSP) .  Through this … Program makes genomes and multi-omics data from JGI CSP projects publicly available at the PhycoCosm portal . …
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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to advancing the field of genomics through open access to resources and promoting data sharing to accelerate discovery … ability of the principal investigators of approved JGI user projects to publish the primary report of their data without …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… proposal by the DOE’s Joint BioEnergy Institute (JBEI), the JGI worked on resequencing several eucalypt genomes to … between the two species. The work was reported in the journal Heredity . In order to understand the gene expression … and abiotic stress responses. Overall, this study improves our understanding of the terpene synthase gene family and …
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Informatics Advisory Committee
… The IAC is chartered by the JGI Chief Informatics Officer (CIO) and reports to the JGI Director. The IAC is chartered to render advice, … the effective management and strategic objectives for the JGI’s data science, informatics and information technology …
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Training the Next Generation of Talent
… New Graduate Internship Program Builds Bridges Between DOE JGI, UC Merced Days after presenting the results of his … challenges UC Merced graduate students with individual projects at the DOE JGI that provide hands-on experience in … a part of the students’ thesis,” she says. “Second, we want our students to gain the opportunity to see what research is …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… releasing fresh organic carbon which can serve as a food source for other microbes into the environment. Summary In J. … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … dubbed these viruses Altivir, finding them in three of the four subsurface ecosystems known to host Altiarchaea. The …
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A Collaboration to Improve Plant Genome Annotations Across Species
… improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led a team that  recently … JGI Plant Gene Atlas is a huge updateable transcriptome resource spanning diverse plant species. It was developed to … Centralized databases with large-scale transcriptome projects such as Expression Atlas and PPRD could help with …
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Improving the Cacao Genome and Phytozome
… for comparative purposes on the latest version of the JGI plant portal Phytozome at  phytozome-next.JGI.doe.gov . One of the goals in updating the genome … working to address some of the most pressing challenges of our time. For more information, please visit  …
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Uncovering Novel Genomes from Earth’s Microbiomes
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Path for Metagenomics Researchers Building upon these resources, KBase, a multi-institutional collaborative knowledge … hope JGI and other institutions continue to do this kind of projects.” The work also used resources of the  National …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the … the much more extensive taxonomic and genetic sampling, our study confirmed the affinity between Olpidium and the … albeit rather weakly. Further investigation on the source of controversy revealed that the branches among …
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Mapping the Earth’s Hidden Fungal Kingdom
… past billion years, fungi have spread quietly throughout our planet. From the deepest ocean floors to Antarctic … with the Department of Energy (DOE) Joint Genome Institute (JGI)’s Fungal and Algal Science Program and JGI users have … like MycoCosm , the JGI’s online fungal genomics resource platform, reveals a stark imbalance. More recently …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … DSMZ overall, resulting not only in a valuable sequence resource to complement DSMZ’s vast strain resource, but also … of genomic DNA at DSMZ for GEBA-Actino and similar projects. …
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