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Bacteria and Fungi Divvy Up the Work in Forest Floor
… plant fibers. The Science Walk in a temperate forest filled with Norway spruce trees, and microbial activity teems … a key ecosystem nutrient. The Impact This study is the first to dig into a forest floor ecosystem to discover what … sequences assembled as part of its 1000 Fungal Genomes Project . To map microbial activity, Baldrian’s team …
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iPHoP: A Matchmaker for Phages and their Hosts
… helps fill in what cultivation can’t. The Science At first, viruses are merely toolkits. To do anything, they … these hosts are microbes like bacteria, not humans. With metagenomic sequencing, researchers have found more of … at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… grass that can grow year-over-year on marginal soil and with few resources. Despite the low maintenance, it can produce an impressive amount of biomass which could then be converted into … have also harnessed the switchgrass gardens for other projects. At the 2021 JGI Annual Meeting, David Lowry talked …
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Disclaimer
NOTICE Information from this server resides on a computer system funded … monitoring of this use by system or security personnel. … With respect to documents available from this server, … by trade name, trademark, manufacturer, or otherwise, does not necessarily constitute or imply its endorsement, …
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NeLLi — Symposium on New Lineages of Life
The DOE Joint Genome Institute hosted the hybrid “NeLLi 2023 Symposium” delving into the most recent expansions of the Tree of Life and latest discoveries toward … Program Tanja Woyke, Microbial Program Robert Bowers,  User Project Coordination Rekha Seshadri,  Functional Annotation …
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JGI Workshop at SIMB NP Meeting
Jan. 7: New Capabilities to Study Secondary Metabolism   … a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict BGCs from available genome sequences. The DOE Joint Genome Institute (JGI), a DOE Office of Science …
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Biochemical characterization of Fsa16295Glu from “Fervidibacter sacchari,” the first hyperthermophilic GH50 with β-1,3-endoglucanase activity and founding member of the subfamily GH50_3
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
University in Fort Collins. He’s part of a JGI-supported project studying the world’s rivers and their microbial … how microbes might be influencing its health.  He sat down with me to talk about his project, and riffed a bit on what … today. I teach a class on ecosystem ecology — and I tell my students, you know, this is not academic. I mean, this is in …
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Biotech Partners Summer Intern Co-Authors NAR Paper
Kaushal Sharma, one of five Antioch High School rising juniors who participated in internships at the DOE Joint Genome Institute this summer through the Biotech Partners …
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Simon Roux
Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome … approaches to link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the … interactions in microbial systems. Through a 2021 DOE Early Career Research Program, Dr. Roux established and …
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JGI announces 2024 New Investigator portfolio
The JGI is eager to work and share our tools with a widening circle of researchers. That’s why each year we look for novel research projects — aligned with DOE missions and from PIs who have not led any …
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Fishing for Novel Cellulose Degraders
… of equipment for fly fishing is a boxful of lures. Designed with feathers or wires to mimic an insect or a particular … led by Tanja Woyke at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … approach to isolate cellulose-degrading microbes. They first bound single microbes to fluorescently labeled …
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