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Reconstructing each cell's genome within complex microbial communities—dream or reality?
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Covariation of hot spring geochemistry with microbial genomic diversity, function, and evolution
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A One-Stop Shop for Analyzing Algal Genomes
… The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science … sequence and understand. A team of researchers led by Algal Genomics Program lead Igor Grigoriev and data scientist Alan … tools created by JGI researchers, including the Integrated Microbial Genomes and Microbiomes (IMG/M) system for …
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Comparative Genomics Using the Integrated Microbial Genomes and Microbiomes (IMG/M) System: A Deinococcus Use Case
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Help from Citrus’ Bitter, Hardier Cousin
… to disease-resistance that could prove fruitful for saving Citrus from greening disease. You’ve probably never heard of trifoliate … rootstock for  Citrus , appeals in other ways. It better tolerates cold, withstands pests, and, especially tantalizing, … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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A survey of computational approaches for characterizing microbial interactions in microbial mats
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DAP-seq Drives Robust Mapping of Gene Regulation
… Multi-species assays yield an unprecedented view of plant evolution and adaptation.    Understanding how genes are regulated is like deciphering the complex … variability between separate experiments. DAP-seq has revealed nearly identical binding sites for proteins from …
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Fishing for Novel Cellulose Degraders
… A “bait and hook” single-cell genomic approach to bioprospecting. The Science One of the most vital pieces of equipment for fly fishing is a boxful of lures. … characteristics. When they tested the screen method on a microbial community from geothermal hot springs, they …
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JGIota: A Surprise for Chloroflexota — The First Flagella!
… Marike Palmer and Brian Hedlund study organisms living in hot springs. Hear how their recent work revealed more about the history of the Chloroflexota phylum …
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A chromosome-level genome assembly of the varied leaved jewelflower, Streptanthus diversifolius, reveals a recent whole genome duplication
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Conservation of Endophyte Bacterial Community Structure Across Two Panicum Grass Species
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Plant compartment and biogeography affect microbiome composition in cultivated and native Agave species
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