MVP: a modular viromics pipeline to identify, filter, cluster, annotate, and bin viruses from metagenomes.
Results
Sequencing and functional validation of the JGI Brachypodium distachyon T‐DNA collection
Direct pathway cloning of the sodorifen biosynthetic gene cluster and recombinant generation of its product in E. coli
JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
Identification, Heterologous Expression, and Characterization of the Tolypodiol Biosynthetic Gene Cluster through an Integrated Approach
DOE JGI Metagenome Workflow
Uncovering secondary metabolite evolution and biosynthesis using gene cluster networks and genetic dereplication
Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
Zwartia hollandica gen. nov., sp. nov., Jezberella montanilacus gen. nov., sp. nov. and Sheuella amnicola gen. nov., comb. nov., representing the environmental GKS98 (betIII) cluster.
JGI Portals
Comparative transcriptomics as a guide to natural product discovery and biosynthetic gene cluster functionality
iPHoP: A Matchmaker for Phages and their Hosts
