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The Genomes of the Fungal Plant Pathogens Cladosporium fulvum and Dothistroma septosporum Reveal Adaptation to Different Hosts and Lifestyles But Also Signatures of Common Ancestry
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Transcriptomics reveal a mechanism of niche defense: two beneficial root endophytes deploy an antimicrobial GH18‐CBM5 chitinase to protect their hosts
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… assistance of microscope. “It’s 5,000 times bigger than most bacteria. To put it into context, it would be like a … filamentous bacterium, along with its life cycle. For most bacteria, their DNA floats freely within the cytoplasm of their cells. This newly discovered species of bacteria keeps its DNA more organized. …
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, … level. Integrating genomics with metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also … and analyzing primary and secondary metabolites helps uncover their roles in processes such as nutrient cycling, …
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Fungal & Algal Program
… natural products, and environmental solutions, fostering a bioeconomy powered by nature’s resources. … endophytes, growth promoters, or pathogens) and as the most efficient degraders of plant biomass. These abilities …
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Complete genome sequence of Methanothermus fervidus type strain (V24ST)
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Plant Program
… and bolster agricultural resilience. The program’s discoveries support a plant based bioeconomy where plants are a … of plants’ biological and ecological roles to foster sustainable solutions for energy, agriculture and the … DOE, designating a set of JGI plant genomes that are the most important to DOE mission and plant science. These …
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Fungal Friends or Foes in Plant Roots
… Uncovering associations between plant roots and fungi that can help or harm plant host health. The Science Researchers compared the genomes of … the plant’s health and diversity, which can in turn boost yields for both food and for candidate bioenergy … by the Deutsche Forschungsgemeinschaft. F.M. salary was covered by the DECRyPT 2125 programme. This research was also …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… to build on existing strengths to accomplish this vision.” Over a year and a half, Visel drove the effort, comprised of … expertise to grow in areas such as developing pathogen-agnostic detection and prediction strategies for types of … with other user facilities, and with JGI users, we aim to foster awareness and collaboration in support of our goals,” …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… many obscure fungi of Chytridiomycota (the “chytrids”). Most of the attention on Olpidium was from agricultural … tobacco. Olpidium itself doesn’t cause much damage to the hosts, but they are carriers of several viruses (e.g., … of rapid development of binning methods, we were able to recover Olpidium sequences from the “contaminated” genome data …
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The More the Merrier: Making the Case for Plant Pan-genomes
… their evolution, the genomes of flowering plants multiply. Over time, plants lose many genes after such events, … polyploid genomes in a pan-genomic context so we don’t overestimate the evolution that happened after … polyploid genomes to the pan-genome to better estimate post-polyploidization evolution.” One Polyploid Species, Two …
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A Plant Root Atlas for Tracking Developmental Trajectories
… the United States, and is working to address some of the most pressing challenges of our time. For more information, …
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