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CSP Functional Genomics
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Uncovering Novel Genomes from Earth’s Microbiomes
… scientist in Nikos Kyrpides’  Microbiome Data Science group. “What makes this study really stand out from previous … Adding Value Beyond Genome Sequences Much of the data had been generated from environmental samples  sequenced by the … associating 81,000 viruses – 70% of which had not already been associated with a host – with 23,000 MAGs. Modeling A …
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Open Frameworks Training the Next Generation of Scientists
… participants. Over the past two years, Myco-Ed has been used in 15 individual classrooms across the country, … Biology Knowledgebase (KBase). The JGI and KBase are both supported by the DOE Biological and Environmental Research … reproducible computational biology analysis. KBase also supports  MICROnet (Microbiomes In Computational Research …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… over a billion years old. It’s an insanely diverse group of organisms that include some delicious additions to a … at making proteins likely factors into why fungi have been so evolutionary and ecologically successful,” Wint … portals used by the JGI to process data. These areas had been previously identified as gaps in the curriculum through …
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JGI-TMF Critical Minerals and Materials Call
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Understanding Wildfire Recovery, Starting in Soil
… The Impact Healthy forests store carbon, filter water, and support all kinds of plants and animals, but with climate … This work was supported through a USDA NIFA award (2021-67019-34608) to … Cancer Center’s Genomics Shared Resource, which is supported by the Cancer Center Support Grant P30CA046934. …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… on the order of 100 times the size of what has typically been associated with viruses, while the genomes of large … belong to the nucleocytoplasmic large DNA viruses (NCLDV) supergroup. The expansion of the diversity for large and … known about the NCLDV group has come from viruses that have been co-cultivated with amoeba or with their hosts, though …
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Alabama A&M Interns Access An Abundance of Knowledge
… called Brachypodium distachyon. LaMonika Dent : We have been working on creating transgenic plants with CRISPR Cas9 … here is the community aspect. Everyone here has also been so very nice and willing to lend a helping hand at any … just watching and observing your mentor, but also being a support for them and contributing to what they’re trying to …
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JGI Announces 2025 New Investigator Portfolio
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Styling for Safety: PPE, It’s the JGI Way
… National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing … these challenges.  DOE’s Office of Science is the largest supporter of basic research in the physical sciences in the …
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Promoting the Power of Viral Metagenomics
… a postdoctoral fellow in the JGI Microbiome Data Science Group led by Kyrpides. Since early 2020, people all over the world have been forced to confront the awesome power that viruses have … the bulk DNA or RNA contained in a sample that has been collected from any kind of environment you can think of …
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How Maize Makes An Antibiotic Cocktail
… called terpenoids, which have a structure belonging to a group of chemicals called terpenes. Terpenes are important in … is a critical biochemical defense in maize, which has been largely overlooked, according to the study’s senior … Research was supported by grants from the USDA NIFA AFRI (1758976 to A.H. …
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