Results

De novo Nanopore read quality improvement using deep learning
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High-density CRISPRi screens reveal diverse routes to improved acclimation in cyanobacteria.
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Complementary Metagenomic Approaches Improve Reconstruction of Microbial Diversity in a Forest Soil
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An expanded evaluation of protein function prediction methods shows an improvement in accuracy
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Systems Metabolic Engineering of Escherichia coli Improves Coconversion of Lignocellulose‐Derived Sugars
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Adaptive laboratory evolution for improved tolerance of isobutyl acetate in Escherichia coli
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Axel Visel
Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science … for elucidating the gene regulatory landscape of vertebrate genomes, which led to the discovery of thousands of genetic … in developmental and disease processes in the human genome. In addition to his appointment at the DOE Joint …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… are abundant and yet exceptionally small, with mini genomes to match. As a result, they cannot process all of … the DPANN superphylum of Archaea. This pair is abundant in two subsurface ecosystems in very different parts of the … exist. Investigating the CRISPR spacer systems of these two organisms suggested new possibilities beyond the current …
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Microbial Genomics & Metagenomics (MGM) Workshop
… has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on … designed to familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for computational analysis and …
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RegTransBase – a database of regulatory sequences and interactions based on literature: a resource for investigating transcriptional regulation in prokaryotes
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FOAM (Functional Ontology Assignments for Metagenomes): a Hidden Markov Model (HMM) database with environmental focus
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The secondary metabolism collaboratory: a database and web discussion portal for secondary metabolite biosynthetic gene clusters
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