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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… to recover high value products from human waste. They   genetically modified yeast to efficiently convert elements … hydroxyapatite, a high-value biomaterial with a wide range of industrial applications. The team was led by researchers … industrial processes.  To increase the interest in urine diversion processes, JGI and Foundry researchers sought other, …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent greenhouse gas, regulate Earth’s … little makers rely on to survive. Now, new research enabled by the U.S. Department of Energy (DOE) Joint Genome … how methanogenesis takes place in the context of the genetic material of many different organisms in an …
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Integrating Experimentation with Data
… $700    Thanks for joining the Joint Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory … The JGI and EMSL are U.S. Department of Energy (DOE) Office of Science national scientific user … informatic tools at no cost. The JGI and EMSL are supported by the DOE's Biological and Environmental Research (BER) …
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The Case for Conservation
… genome . Now, high-quality reference genome sequences of the male and female plants, each representing a single … In a recent Scientific Advances article , a team led by McDaniel and his former graduate student Sarah Carey, now … working with researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Understanding the shared genetic toolkit of ancestral and present-day plants The … in Marchantia and later plant lineages that independently expanded. Along with NLRs, the diversified peroxidases are … ) conducted by the US Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 …
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Learning to Look
… “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be … July 22, 2019, in  Nature Microbiology , a team led by scientists at the U.S. Department of Energy (DOE) Joint … As their small genomes can be easily manipulated through genetic engineering, inoviruses are used for several …
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Expanding standards in viromics: in silico evaluation of dsDNA viral genome identification, classification, and auxiliary metabolic gene curation
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IMG/VR v4: an expanded database of uncultivated virus genomes within a framework of extensive functional, taxonomic, and ecological metadata.
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Expanded genome and proteome reallocation in a novel, robust Bacillus coagulans strain capable of utilizing pentose and hexose sugars
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Game On: High School Students Drive Everglades Metagenomics Study
… In late June, Kathleen Lail, a member of JGI’s Sample Management Group, attended a conference in … Metagenome Program Head at the  U.S. Department of Energy (DOE) Joint Genome Institute (JGI) , a DOE Office of Science … to the body of scientific knowledge that can be accessed by the rest of the community. These high school students now …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring polar bears in winter … to Filter Sequences There are more microbes on the planet than particles in a handful of dirt, and viruses vastly … not appear to be evenly distributed around the world. One expanded group is of viruses associated with bacteria; until …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base are … warmer waters, including the tropics, tend to be dominated by prokaryotes (microorganisms without a defined nucleus). … to this fundamental observation of cold and warm microbial networks, and just how clear and stark the biogeographic …
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