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Predicting the chemical space of fungal polyketides by phylogeny-based bioinformatics analysis of polyketide synthase-nonribosomal peptide synthetase and its modification enzymes
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Symbiotic Burkholderia Species Show Diverse Arrangements of nif/fix and nod Genes and Lack Typical High-Affinity Cytochrome cbb3 Oxidase Genes.
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
A quick snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses spread their DNA, they can …
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A Plant Root Atlas for Tracking Developmental Trajectories
A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, … Universität zu Berlin   has developed an atlas that maps gene expression patterns in the  Arabidopsis root, profiling … with the JGI’s growing efforts in establishing plant and fungal single-cell and spatial transcriptomic technologies, …
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Divergent Evolution of Early Terrestrial Fungi Reveals the Evolution of Mucormycosis Pathogenicity Factors
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Lineage-specific chromatin signatures reveal a regulator of lipid metabolism in microalgae
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RegPrecise 3.0 – A resource for genome-scale exploration of transcriptional regulation in bacteria
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Genome-wide role of codon usage on transcription and identification of potential regulators
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Agave REVEILLE1 regulates the onset and release of seasonal dormancy in Populus.
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Expanding Virophage Diversity
… viruses. Almost all known virophage genomes share only four genes in common: major and minor capsid proteins (MCP and … in  Microbiome , researchers from the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … a global analysis of the diversity, distribution, and evolution of virophages.” Lead author David Paez-Espino  …
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A large sequenced mutant library – valuable reverse genetic resource that covers 98% of sorghum genes
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Investigation of recombination-intense viral groups and their genes in the Earth’s virome
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