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The More the Merrier: Making the Case for Plant Pan-genomes
… traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” with respect to … Universidad de Zaragoza and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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Fungus Fuels Tree Growth
… of particular interest to the U.S. Department of Energy (DOE). By better understanding how poplar responds to its intimate … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, through its  … Research at the United States Department of Energy (DOE) Office of Science. ORNL is managed by UT-Battelle, LLC, …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… JGI researchers lend expertise to develop tools and data hub … the stars in the Milky Way, viruses outnumber the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE Office of Science user … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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Waiting to Respire
… ability to produce their own food and generate oxygen as a byproduct. The abundance of oxygen shaped the evolution of … of UC Berkeley geomicrobiologist Jill Banfield, a longtime JGI collaborator, postdoctoral fellow Paula Matheus … Program head Tanja Woyke of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… is a research scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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Gene Expression: From On-Off Switch to Dial
… on, scientists can determine the level of gene expression by the gradations. The Impact Metabolic engineering could … systems, expanding the technologies available for other JGI users outside the realm of bioenergy optimization. … and included researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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Expanding Virophage Diversity
… Microbiome , researchers from the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the … genome sequences 10-fold through computational approaches. By mining more than 14,000 publicly available metagenomic …
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Metagenome Program
… approaches to assess microbial activity across ecosystems.  By studying microbial communities and their interactions, … environmental sustainability, and many other applications. By understanding how microbes contribute to ecosystem … complex interactions and functions that shape ecosystems. By decoding the microbial DNA in natural environments, the …
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Scaling Up Existing Skill Sets
… Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven JGI researchers for bioinformatics internship opportunities … Analysis What effect has your summer internship with the JGI had on your plans to pursue a STEM career?
 Doing the …
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Counting dots or counting reads? Complementary approaches to estimate virus-to-microbe ratios
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Computationally Classifying Fungal Lifestyles
… genomes of Dothideomycetes, the largest class of fungi, by lifestyles. The machine “learned” to identify data … A team led by researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported under …
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Ian Blaby
… Since 2019 Dr. Blaby heads the DNA synthesis platform at the Joint Genome … biology and functional genomics. Prior to joining the JGI, he was a group lead at Brookhaven National Laboratory … Ian Blaby on Google Scholar Grosjean et al ., A hemoprotein with a … 11. 2023 Liu et. al., Bacterial genome editing by coupling Cre-lox and CRISPR-Cas9 systems. PloS one. 15: …
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