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Analysis of Ten Brucella Genomes Reveals Evidence for Horizontal Gene Transfer Despite a Preferred Intracellular Lifestyle▿ §
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JGI-UC Merced Interns Share Their 2021 Experiences
During the summer of 2021, 13 interns from UC Merced spent … virtually with JGI mentors to investigate rigorous research projects, hone science presentation skills, and participate … of Phage Impact on Microbial Root … Cross Species Comparison of Plant Single-cell Transcriptomes of Rice and …
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Benjamin Cole
Dr. Cole is interested in studying how plants interact with their … Dr. Cole’s research focus has been on understanding how microbes can colonize plant roots, focusing on genetic components required for effective colonization. In addition, …
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Picking Up Threads of Cotton Genomics
… for all this new cotton work, and even the original cotton project was to try to bring in molecular methods of breeding … is the premier natural fiber crop of the world, a major oilseed crop, and important cattle feed crop,” noted David … energy generation and environmental characterization and cleanup. The JGI provides integrated high-throughput …
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A Complex Confection Decoded: Sugarcane Reference Genome
… genome and now crop researchers can work toward advancing sugarcane biotechnology. The Science Considered the … 80% of sugar production worldwide, but has one of the most complex genetic blueprints. Assembling a genome has been … of Experimental Botany (IEB) was supported by the ERDF project “Plants as a Tool for Sustainable Global …
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JGI announces 2024 Functional Genomics awardees
… genomics research from reseachers who translate genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that will leverage the JGI’s DNA synthesis and … in support of advancing the bioeconomy.  This year’s project goals range from improving crop productivity for …
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Jane Grimwood Named HudsonAlpha Genomics Chair
Congratulations to Jane Grimwood, who has been appointed the Loretta Purdy Spencer Chair in Genomics at the … after the JGI was established to work on the Human Genome Project in 1997. She was a group lead at Stanford Human … paper announcing a high-quality reference sequence of the complex switchgrass genome , using samples from common …
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Learning to Look
Machine learning approach significantly expands inovirus … inoviruses are in every major microbial habitat—including soil, water, and humans—around the world. By the numbers, the … energy generation and environmental characterization and cleanup. The JGI provides integrated high-throughput …
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Metagenomic Methods for Addressing NASA's Planetary Protection Policy Requirements on Future Missions: A Workshop Report
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Exploring Polymorphisms Created by Transposable Elements
My project at the Joint Genome Institute (JGI) was to measure the polymorphisms that transposable elements (TEs) contributed to in the grass model species Brachypodium hybridum . …
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Horizontal gene transfer of the Mer operon is associated with large effects on the transcriptome and increased tolerance to mercury in nitrogen-fixing bacteria
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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible … Genomes (IMG) data management system … As part of this project, pairwise average nucleotide identities (ANI) and …
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