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… the Integrated Microbial Genomes & Microbiomes (IMG/M) database maintained by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, for publicly available metagenome data … datasets from a variety of environments, as well as tools for analysis. “There is evidence that methanogenesis …

Joint Genome Institute (DOE JGI), a DOE Office of Science user facility, Keedrian Olmstead was back on campus at the … genome research and apply experimental and computation tools to solve research problems. In Visel’s group, Olmstead … says. “Many academic labs don’t know how to analyze RNA-Seq data very well, sending it out to companies. I’ll take that …

… an array of experiments at universities and national user facilities, researchers found that this protein detects … or DRI for short.  A kaleidoscope of structure-function data To study DRI experimentally, Blaby-Haas, Grosjean and … function inside the cell, Grosjean used the JGI-developed  guideRNA and Sequence Extraction Tool (gRNA-SeqRET) to …

… of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory, … by a fellowship to M.K. in the Helmholtz School for Marine Data Science (grant number HIDSS-0005) and by a grant to J. … a US Department of Energy Office of Science User Facility, is supported by the Office of Science of the …

In the last two episodes, we’ve covered the specialized software and supercomputers behind this project. But every …

… that giant assembly from Lake Mendota. In this episode: the software evolution that made metagenome assemblies like this …

Joint Genome Institute (JGI) , a DOE Office of Science User Facility. She took special interest in it because she … through over 55 billion genes and 16 trillion DNA bases of data, to figure out what to study and compare for the … tests for raw data and how to use some bioinformatics tools for analysis to help them focus on what to pull out …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, hosted three undergraduates and seven … months, the students participated in networking workshops, data carpentry hackathons, and also made new friends while … ” Anna Kucherova : “I got to learn about skills and tools that I’d never done before from my mentors. Also, …