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Abiotic selection of microbial genome size in the global ocean
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Virus-Microbe Interactions of Mud Island Mangroves
… worked with the JGI through a Community Science Program (CSP) proposal, and Rambo’s research builds on that. “The … Rambo’s work was overseen by Susannah Tringe, head of the Microbial Systems group. He also worked with Simon Roux and … experience was “an ideal opportunity for me to get real-world experience.” As he finalizes his dissertation, he …
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Operating Expenses
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A Natural Mechanism Can Turbocharge Viral Evolution
… The first step in the deadly dance between a virus and microbial cell is an embrace. For a virus with a “head-tail” … on its tail fibers to latch onto a specific target on the microbial cell’s membrane. Two decades ago, a team discovered a group of viruses that had in their genomes a surprising tool: a “diversity generating …
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Expanded diversity of microbial groups that shape the dissimilatory sulfur cycle
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Protocol for single-cell isolation and genome amplification of environmental microbial eukaryotes for genomic analysis
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… He was also senior author on a study which identified new genomes highlighting the diversity of white rot fungi in the … of a study to develop a method for identifying polyploid subgenomes without needing to know the genomes of their ancestors. Tanja Woyke contributed to a …
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Annual Meeting 2027
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Calculating the Costs of Multiple Switchgrass Gene Copies
… team surveying the genomic and phenotypic diversity across the natural range of switchgrass found that … naturally occurring ploidy levels, called cytotypes, across the species. These are primarily tetraploids (4X or … we contrasted the diversity of 4X and 8X switchgrass across hundreds of naturally-occurring genotypes (in this …
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How Filamentous Fungi Sense Food
… with a full toolbox including Phillips and specialty screwdrivers, not to mention Allen wrenches. The fungi are … in depth for multiple models and their close relatives across the fungal tree of life, enriching the work being done as part of the 1000 Fungal Genomes Project. Funding for the project was also provided …
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Leo Baumgart
… gene regulation at the level of individual cells across diverse plant tissues. Dr. Baumgart focuses on … Graham, Ramon Huerta, Ryan Johnson, and Lev Tsimring. "Microbial microfluidic biosensor." U.S. Patent 11,209,412, … William Mather, and Jeff Hasty. "Synchronized DNA cycling across a bacterial population." Nature genetics 49, no. 8 …
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An Automated Tool for Assessing Virus Data Quality
… recovered and identified from environmental samples (metagenomes). However, the quality and completeness of … the genomes of these viruses and associate them with their microbial hosts. However, assembling viral genomes from … a total of 44,652 complete or near-complete viral genomes across both datasets, separating these from the vast …
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